Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 28 Aligned Residues 296 % Identity 14% Template c1b7gO_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:protein (glyceraldehyde 3-phosphate dehydrogenase); PDBTitle: glyceraldehyde 3-phosphate dehydrogenase Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		M	L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	.	.	.	.	.	.	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D
Query Conservation																																																			.	.	.	.	.	.
Alig confidence										.																																									.	.	.	.	.	.
Template Conservation										.
Template Sequence		M	V	N	V	A	V	N	G	.	Y	G	T	I	G	K	R	V	A	D	A	I	I	K	Q	P	D	M	K	L	V	G	V	A	K	T	S	P	N	Y	E	A	F	I	A	H	R	R	G	I	R	I	Y	V	P	Q	Q	S	I	K	K	F	E	E	S	G	I	P	V	A	G	T	V	E	D	L	I	K	T	S	D
Template Known Secondary structure										.		S												T		T	T									S	S		S									T	T							G	G	G						T	T	T															S
Template Predicted Secondary structure										.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	V	D	T	T	P	N	G	V	G	A	Q	Y	K	P	I	Y	L	Q	L	Q	R	N	A	I	F	Q	G	G	E	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	I	S	F	S	A	L	C	N	Y	N	E	A	L	G	K	K	Y	I	R	V	V	S	C
Template Known Secondary structure								S	T	T												T	T							T	T	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S													T	T		S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N
Query Conservation
Alig confidence																																						.																				.	.											.	.
Template Conservation																																						.																				.	.											.	.
Template Sequence		N	T	T	A	L	L	R	T	I	C	T	V	N	K	V	S	K	V	E	K	V	R	A	T	I	V	R	R	A	A	D	Q	K	E	V	K	.	K	G	P	I	N	S	L	V	P	D	P	A	T	V	P	S	H	H	A	.	.	K	D	V	N	S	V	I	R	N	L	.	.	D	I	A	T	M	A	V	I	A	P
Template Known Secondary structure															T	T	S													S	S		T	T			S	.				S	S					S	S	S	S	S	S		T			.	.					T	T	S	T	T		.	.										S
Template Predicted Secondary structure																																						.																				.	.											.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	.	.	.	.	.	.	.	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	.	.	.	.	.	.	.	.	G	F	A	V	Q	G	E
Query Conservation																																												.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.										.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		T	T	L	M	H	M	H	F	I	N	I	T	L	K	D	K	V	E	K	K	D	I	L	S	V	L	E	N	T	.	.	.	.	P	R	I	V	L	I	S	S	K	Y	D	A	E	A	T	A	E	L	V	E	V	A	R	D	L	K	R	D	R	N	D	I	P	E	V	M	I	F	S	D	S	I	Y	V	K	D	D
Template Known Secondary structure			S	S											S	S													T		.	.	.	.	T	T						S	S	S	S			S											T	T		G	G	G				S					G	G	G					T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		E	V	M	L	M	Y	A	V	H	Q	E	S	.	I	V	V	P	E	N	I	D	A	I	R	A	S	M	K	L
Template Known Secondary structure											T	T	T	.	T													T	T
Template Predicted Secondary structure														.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions