Job Description P23843 Confidence 40.16% Date Thu Jan 5 11:39:51 GMT 2012 Rank 45 Aligned Residues 71 % Identity 10% Template c3ix1A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	T	Y	L	P	I	A	S	E	V	T	D	V	N	R	Y	R	S	G	E	I	D	M	T	N	N	S	M	P	I	E	L	F	Q	K	L	K	K	E	I	P	D	E	V	H	V	D	P	Y	L	C	T	Y	Y	Y	E	I	N	N	Q	K	P	P	F	N	D	V	R	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	D	I	V	F	P	T	N	P	T	D	P	I	Q	L	T	A	S	G	A	I	P	L	A	L	S	Y	Q	P	D	V	I	L	A	R	S	K	D	L	P	V	V	S	V	A	S	V	V	R	S	P	L	N	H	V	M	F	L	A	E	Q	D	F	D	S	P	A	D	L	V
Template Known Secondary structure									S	S	T	T									T	S		S															T	T												S									G	G	G			S	S	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions