 |
Job Description | P23843 | Confidence | 64.46% | Date | Thu Jan 5 11:39:51 GMT 2012 |
Rank | 32 | Aligned Residues | 58 |
% Identity | 16% | Template | c3ir1F_ |
PDB info |
PDB header:protein binding | Chain: F: PDB Molecule:outer membrane lipoprotein gna1946; |
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis
|
Resolution | 2.15 Å |
|
 |
  |   |
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | |
. | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | I | N | L | L | Y | N | T | S | D | L | H | K | K | L | A | I | A | A | S | S | L | W | K | K | N | I | G | V | N | V | K | L | V | N | Q | . |
E | W | K | T | F | L | D | T | R | H | Q | G | T | F | D | V | A | R | A | G | W | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
K | E | I | V | F | G | T | T | V | G | D | . |
F | G | D | M | V | K | E | Q | I | Q | P | E | L | E | K | K | G | Y | T | V | K | L | V | E | F | T | D | Y | V | R | P | N | L | A | L | A | E | G | E | L | D | I | N | V | F | Q | H | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S | S |  | . |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|