Job Description P23843 Confidence 30.72% Date Thu Jan 5 11:39:51 GMT 2012 Rank 53 Aligned Residues 74 % Identity 8% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	T	Y	L	P	I	A	S	E	V	T	D	V	N	R	Y	R	S	G	E	I	D	M	T	N	N	S	M	P	I	E	L	F	Q	K	L	K	K	E	I	P	D	E	V	H	V	D	P	Y	L	C	T	Y	Y	Y	E	I	N	N	Q	K	P	P	F	N	D	V	R	V	R	T	A	L	K	L	G	M	D
Query Conservation
Alig confidence																													.	.																																	.	.	.	.	.
Template Conservation																													.	.																																	.	.	.	.	.
Template Sequence		I	D	V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	A	F	S	.	.	V	D	K	S	I	L	L	G	Y	V	D	D	K	S	E	I	L	P	D	S	F	E	P	Q	S	Y	G	I	V	T	K	K	.	.	.	.	.	D	D	P	A	F	A	K	Y	V	D	D	F	V	K
Template Known Secondary structure										S	S										T	T	S	S	S				.	.							T	T	T			T	T					S				S										T	.	.	.	.	.	T
Template Predicted Secondary structure																													.	.																																	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.
		325
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions