 |
Job Description | P33025 | Confidence | 31.15% | Date | Thu Jan 5 11:51:01 GMT 2012 |
Rank | 68 | Aligned Residues | 73 |
% Identity | 22% | Template | c3nxkE_ |
PDB info |
PDB header:hydrolase | Chain: E: PDB Molecule:cytoplasmic l-asparaginase; |
PDBTitle: crystal structure of probable cytoplasmic l-asparaginase from2 campylobacter jejuni
|
Resolution | 2.40 Å |
|
 |
  |   |
125 | . | . | . | . | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
. | . | . | . | . | . | 190 | . | |
|
. | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |
|
|
| . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
Query Sequence |   |
I | K | V | F | A | T | G | G | . |
I | G | G | V | H | R | G | A | E | H | T | F | D | I | S | A | D | L | Q | E | L | A | N | T | N | V | T | V | V | C | . |
. |
. |
. |
. |
. |
A | G | A | K | S | I | L | D | L | G | L | T | T | E | Y | L | E | T | F | G | V | . |
. |
P | L | I | G | Y | Q | T | K | . |
. |
A | L |
Query Conservation |   |
|   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|   | . | . | . | . | . | . |
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|   |
|
| . | . |   |
|   |
|
|   |
|   | . | . |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
I | A | I | L | G | T | G | G | T | I | A | G | F | A | I | D | I | D | V | L | I | K | A | V | P | Q | I | R | D | L | A | D | I | S | W | E | Q | I | A | N | I | D | S | S | N | X | C | D | E | I | W | L | R | L | A | K | K | I | A | K | L | F | A | E | G | I | D | G | V | V | I | T | H | G | T | D | T | X | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S | T | T |
|
|
|
|
|  |  |  |  | T | T | S | S | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| S | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
194 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
P | A | F | F |
Query Conservation |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|   |   |
Template Sequence |   |
T | A | Y | F |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
101 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|