Job Description P33025 Confidence 31.53% Date Thu Jan 5 11:51:01 GMT 2012 Rank 67 Aligned Residues 210 % Identity 22% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.															.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	D	A	L	K	N	K	K	P	V	V	A	L	E	S	T	I	I	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	P	F	P	Q	N	A	Q	T	A	I	E	V	E	E	T	I	R	K	Q	G	.	.	A	V	P	A	T	I	A	I	I	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	T	A	R	K	M	G	I	S	T	V	A	I	Y	S	D	A	D	K	Q	A	L	H	V	Q	M	A	D	E	A	V	H	I	G	P	P	P	A	N	Q	S	Y	I	V	I	D	K	V	M	A	A	I	R	A	T	G	A	Q	A	V	H	P	G	Y	G	F	L	S	E	N	S	K	F	A	E	A	L	E	A
Template Known Secondary structure						G	G	G	S			B						S	T	T	S	S							S	S						S	S	S	S	G	G	G	T	T	S												T			S			B			S	S	S	S	T	T										T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.																																									.
Query SS confidence		.																																									.
Query Sequence		.	G	V	M	K	V	G	L	S	K	E	E	I	E	L	L	G	R	E	G	H	N	V	T	K	V	S	R	R	D	L	P	F	V	V	A	A	G	K	N	G	.	A	T	T	V	A	S	T	M	I	I	A	A	L	A	G	I	K	V	F	A	T	G	G	I	G	G	V	H	R	G	A	E	H	T	F	D	I	S
Query Conservation		.																																									.
Alig confidence		.																		.	.																						.																															.	.	.
Template Conservation																				.	.																																																					.	.	.
Template Sequence		E	G	V	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	.	.	K	I	T	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M	G	L	I	E	D	A	D	E	A	V	K	I	S	N	Q	I	G	Y	P	V	M	I	K	A	S	A	M	R	I	A	W	N	.	.	.	D	Q	E	A	R
Template Known Secondary structure		T	T				S	S	S								T	T	S	.	.										T	T	T													S													S	S											B		S	.	.	.
Template Predicted Secondary structure																				.	.																																																					.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	Q	E	L	A	N	T	N	V	T	V	V	C	A	G	A	K	S	I	L	D	L	G	L	T	T	E	Y	L	E	T	F	G	V	P	L	I	G	Y	Q	T	K	A	L	P	A	F	F	C	R	T	S	P	F	D	V	S	I	R	L	D	S	A	S	E	I	A	R	A	M	V	V	K	W	Q	S	G	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	F	Q	S	S	K	N	D	R	I	F	I	.	.	.	.	.	.	.	.	.	.	.	E	K	F	V	T	Q	P	R	H	I	E	I	Q	V	L	C	D	S	H	G	N	G	I	Y	L	G	E	R	E	C	S	I	Q	R	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T							.	.	.	.	.	.	.	.	.	.	.					S	S												T	T	S															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	G	L	V	V	A	N	P	I	P	E	Q	F	A	M	P	E	H	T	I	N	A	A	I	D	Q	A	V	A	E	A	E	A	Q	G	V	I	G
Query Conservation
Alig confidence		.											.	.	.
Template Conservation		.											.	.	.
Template Sequence		.	Q	K	V	V	E	E	A	P	S	P	.	.	.	F	L	D	E	A	T	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	Y	A	S
Template Known Secondary structure		.								S		S	.	.	.	S																			T	T	T			S
Template Predicted Secondary structure		.											.	.	.
Template SS confidence
			297	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions