Job Description P33025 Confidence 63.25% Date Thu Jan 5 11:51:01 GMT 2012 Rank 26 Aligned Residues 85 % Identity 20% Template c3lyhB_ PDB info PDB header:lyase Chain: B: PDB Molecule:cobalamin (vitamin b12) biosynthesis cbix protein; PDBTitle: crystal structure of putative cobalamin (vitamin b12) biosynthesis2 cbix protein (yp_958415.1) from marinobacter aquaeolei vt8 at 1.60 a3 resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.
Query Sequence		I	I	S	H	G	M	P	F	P	Q	N	A	Q	T	A	I	E	V	E	E	T	I	R	K	Q	G	A	V	P	A	T	I	A	I	I	G	G	V	M	K	V	G	L	S	K	E	E	I	E	L	L	G	R	E	G	H	N	V	T	K	V	.	.	.	.	.	.	.	.	.	S	R	R	D	L	P	F	V	V	A
Query Conservation																																																															.	.	.	.	.	.	.	.	.
Alig confidence																													.												.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																													.												.	.
Template Sequence		L	L	A	H	G	S	S	D	A	R	W	C	E	T	F	E	K	L	A	E	P	T	V	E	S	I	E	.	N	A	A	I	A	Y	X	E	L	A	E	.	.	P	S	L	D	T	I	V	N	R	A	K	G	Q	G	V	E	Q	F	T	V	V	P	L	F	L	A	A	G	H	L	R	K	D	V	P	A	X	I	E
Template Known Secondary structure								S																			S	S	.	S						S	S	S	S	S	.	.	S	B											T	T											S	S
Template Predicted Secondary structure																													.												.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	N	G	A	T	T	V	A	S	T	M	I	I	A	A	L	A	G	I	K	V	F	A	T	G	G	I	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	E	A	E	H	G	V	T	I	R	L	A	E	P	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.							T									G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions