Job Description P33025 Confidence 29.46% Date Thu Jan 5 11:51:01 GMT 2012 Rank 71 Aligned Residues 119 % Identity 21% Template c3b40A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable dipeptidase; PDBTitle: crystal structure of the probable dipeptidase pvdm from2 pseudomonas aeruginosa Resolution 2.00 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.											.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																		.	.																																	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		F	P	Q	N	A	Q	T	A	I	E	V	E	E	T	I	R	.	.	K	Q	G	A	V	P	A	T	I	A	I	I	G	G	V	M	K	V	G	L	S	K	E	E	I	E	L	L	G	R	E	G	.	.	.	.	.	.	.	.	.	.	H	N	V	T	K	V	S	R	R	D	L	P	.	F	V	V	A	A	G	K
Query Conservation																		.	.																																	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																		.	.																	.																.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																				.
Template Sequence		F	P	N	Q	V	G	I	A	Y	S	P	E	D	F	R	R	L	A	M	E	G	K	F	A	I	V	M	S	M	L	N	A	Y	P	.	L	G	D	D	L	S	Q	L	D	K	W	A	A	R	G	V	R	M	F	G	F	S	Y	V	G	N	N	D	W	A	D	S	S	R	P	L	P	F	F	N	D	S	P	D	A
Template Known Secondary structure			T	T	T					S	S										T	T											S	G	G	.	G	T	T		T									T	T								S	S	S			S	S	B		B	S	S			G	G	G	T			T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		N	G	A	T	T	V	A	S	T	M	I	I	A	A	L	A	G	I	K	V	F	A	T	G	G	I	G	G	V	H	R	G	A	E	H	T	F	D	I	S	A	.	.	.	.	.	.	.	D	L	Q	E	L	A	N	T	N	V	T	V	V	C	A	G	A	K	S	I	L	D	L	G	L	T	T
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	L	S	P	L	G	K	Q	A	V	E	R	L	N	D	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	D	V	S	Q	M	S	T	K	A	L	E	Q	V	A	A	L	S	R	A	P	I	V	A	S	H	S	A	P	R	A	L	V	D	I	K	R	N	L
Template Known Secondary structure		T	S	S	B															T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	B													S	S									B	T	T	T	S			T	T	S	B
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.																.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions