Job Description P33025 Confidence 92.28% Date Thu Jan 5 11:51:01 GMT 2012 Rank 5 Aligned Residues 148 % Identity 20% Template c2dsjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8 Resolution 1.80 Å

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		75	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure														.															.	.	.
Query SS confidence														.															.	.	.
Query Sequence		G	L	S	K	E	E	I	E	L	L	G	R	.	E	G	H	N	V	T	K	V	S	R	R	D	L	P	.	.	.	F	V	V	A	A	G	K	N	G	A	T	T	V	A	S	T	M	I	I	A	A	L	A	G	I	K	V	F	A	T	G	G	I	G	G	V	H	R	G	A	E	H	T	F	D	I	S	A	D	L
Query Conservation														.															.	.	.
Alig confidence														.															.	.	.																																									.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.
Template Sequence		G	L	D	P	E	E	T	L	W	L	T	E	T	M	A	R	S	G	K	V	L	D	L	S	G	L	P	H	P	V	D	K	H	S	S	G	G	V	G	D	K	V	S	L	V	V	G	P	I	L	A	A	S	G	C	T	F	A	K	M	S	G	R	G	L	A	H	T	G	G	.	.	.	.	.	.	T	I	D	K
Template Known Secondary structure																	T	S	S	B					T	T	S	S	S	B							S	S	S			S	T										T	T	T		B									B	T	T	B			.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.
		151	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Q	E	L	A	N	T	N	V	T	V	V	C	.	A	G	A	K	S	I	L	D	L	G	L	T	T	E	Y	L	E	T	F	G	V	P	L	I	G	Y	Q	T	K	A	L	P	A	F	F	C	R	T	S	P	F	D	V	S	I	R	L	D	S	A	S	E	I	A	R	A	M	V	V	K	W	Q	S	G	L	N	G
Query Conservation														.
Alig confidence				.	.	.	.	.	.	.	.	.		.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		L	E	.	.	.	.	.	.	.	.	.	S	V	P	G	W	R	G	E	M	T	E	A	E	F	L	E	R	A	R	R	V	G	L	V	I	A	A	Q	S	P	D	L	A	P	L	D	G	K	L	Y	A	L	R	D	V	T	A	T	V	E	S	V	P	L	I	A	S	S	I	M	S	K	K	L	A	A	G	A	R
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	T	S	T	T																	T	S					S		G	G	G	B	S												T	T	T																				T		S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	V	A	N	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	L	D	V	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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