|   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | S | K | E | E | I | E | L | L | G | R | E | G | H | N | V | T | K | V | S | R | R | D | L | P | F | V | V | A | A | G | K | N | G | A | T | . |
T | V | A | S | T | M | I | I | A | A | L | A | G | I | K | V | F | A | T | G | G | I | G | G | V | H | R | G | A | E | H | T | F | D | I | S | A | D | L | Q | E | L |
Query Conservation |   |
|
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|
|
| . |
|
|
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |
|   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |
| . | . | . | . | . | . |
|
|
|   |
|
|   |
Template Sequence |   |
G | E | S | K | N | E | I | V | G | F | A | R | A | M | . |
. |
R | E | L | A | I | K | I | D | V | P | N | A | I | D | T | A | G | G | L | G | T | V | N | V | S | T | A | S | A | I | L | L | S | L | V | N | P | V | A | K | H | G | N | R | A | V | S | G | K | S | G | . |
. |
. |
. |
. |
. |
S | A | D | V | L | E | A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | S |
|
|
|
|
| T | T |
|  |  |
|
|
|
|
|
| B |
|
|  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |
|
|
| S | S | S | S |
| S | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 120 |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | T | N | V | T | V | V | C | A | G | A | K | S | I | L | D | L | G | L | T | T | E | Y | L | E | T | F | G | V | P | L | I | G | Y | Q | T | K | A | L | P | A | F | F | C |
Query Conservation |   |
  |
|
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
| . |   |
|   |   |   |   |
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | G | Y | N | I | I | V | P | P | E | R | A | K | E | L | V | N | K | T | N | F | V | F | L | . |
F | A | Q | Y | Y | H | P | A | M | K | N |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . |  | T | B |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  | . |  |  |  |  |  |
| G | G | G | G | G |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . |  |  |  |  |  |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . | . | . |
  |