Job Description P33025 Confidence 93.07% Date Thu Jan 5 11:51:01 GMT 2012 Rank 4 Aligned Residues 211 % Identity 18% Template c1brwB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase); PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation Resolution 2.10 Å

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		75	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																	.	.
Query SS confidence														.	.	.																	.	.
Query Sequence		G	L	S	K	E	E	I	E	L	L	G	R	.	.	.	E	G	H	N	V	T	K	V	S	R	R	D	L	P	F	V	.	.	V	A	A	G	K	N	G	A	T	T	V	A	S	T	M	I	I	A	A	L	A	G	I	K	V	F	A	T	G	G	I	G	G	V	H	R	G	A	E	H	T	F	D	I	S	A	D
Query Conservation														.	.	.																	.	.
Alig confidence														.	.	.																	.	.																																							.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		G	M	T	E	E	E	T	A	A	L	T	M	A	M	V	Q	S	G	E	M	L	D	L	S	S	I	R	G	V	K	V	D	K	H	S	T	G	G	V	G	D	T	T	T	L	V	L	G	P	L	V	A	S	V	G	V	P	V	A	K	M	S	G	R	G	L	G	H	T	G	G	.	.	.	.	.	.	T	I	D
Template Known Secondary structure																	T	T	S							S	S		S											S	S														T	T											B	T	T	B			.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		1049	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.							1120	.	.
		150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		L	Q	E	.	L	A	N	T	N	V	T	V	V	C	A	G	A	K	S	I	L	D	L	G	L	T	T	E	Y	L	E	T	F	G	V	P	L	I	G	Y	Q	T	K	A	L	P	A	F	F	C	R	T	S	P	F	D	V	S	I	R	L	D	S	A	S	E	I	A	R	A	M	V	V	K	W	Q	S	G	L	N
Query Conservation					.
Alig confidence					.								.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		K	L	E	S	V	P	G	F	H	V	E	.	.	.	.	.	.	.	.	.	I	S	K	D	E	F	I	R	L	V	N	E	N	G	I	A	I	I	G	Q	T	G	D	L	T	P	A	D	K	K	L	Y	A	L	R	D	V	T	A	T	V	N	S	I	P	L	I	A	S	S	I	M	S	K	K	I	A	A	G	A
Template Known Secondary structure				T	T	S	T	T					.	.	.	.	.	.	.	.	.													T	S						S		S	S	S													T	T	T																				T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		1123	.	.	.	.	.	.	1130	.	.	.										.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.															.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	V	V	A	N	P	I	P	E	Q	F	A	M	P	E	H	T	I	N	A	A	I	D	Q	A	V	A	E	A	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	V	I	G	K	E	S	T	P	F	L	L	A	R	V	A	E	L	T	G	G	D	S	L	K	S	N	I	Q	L	V	F
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	V	L	D	V	K	T	G	A	G	A	F	M	K	K	L	D	E	A	R	R	L	A	R	V	M	V	D	I	G	K	R	V	G	R	R	T	M	A	V	I	S	D	M	S	Q	P	L	G	Y	A	V	G	N	A	L	E	V	K	E	A	I	E	T	L	K	G	N	G	P	H	D	L	T	E	L	C	L
Template Known Secondary structure		S									S	T	T	S	S			S																	T	T	T											S	S		S	S	S				S											T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		1194	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.
		295	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	G	S	H	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1274	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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