Job Description P33025 Confidence 22.64% Date Thu Jan 5 11:51:01 GMT 2012 Rank 85 Aligned Residues 92 % Identity 14% Template c1a31A_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:protein (topoisomerase i); PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex Resolution 2.10 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		F	C	R	T	S	P	F	D	V	S	I	R	L	D	S	A	S	E	I	A	R	A	M	V	V	K	W	Q	S	G	L	N	G	G	L	V	V	A	N	P	I	P	E	Q	F	A	M	P	E	H	T	I	N	A	A	I	D	Q	A	V	A	E	A	E	A	Q	G	V	I	G	K	E	S	T	P	F	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																							.	.	.	.	.	.	.																	.	.	.	.	.													.	.	.
Template Conservation																																							.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		F	L	G	K	D	S	I	R	Y	Y	N	K	V	P	V	E	K	R	V	F	K	N	L	Q	L	F	M	E	N	K	Q	P	E	D	D	L	F	.	.	.	.	.	.	.	D	R	L	N	T	G	I	L	N	K	H	L	Q	D	L	M	.	.	.	.	.	E	G	L	T	A	K	V	F	R	T	Y	N	A	S	I
Template Known Secondary structure					G	G	G																				T	T	T	T			T	T	S	B	T	T	.	.	.	.	.	.	.	T	T														S	.	.	.	.	.	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.								.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.						.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
				274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	A	R	V	A	E	L	T	G	G	D	S	L	K	S	N	I	Q	L	V	F	N	N	A	I	L	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	L	Q	Q	Q	L	K	E	L	T	A	P	D	E	N	I	P	A	K	I	L	S	Y	N	R	A	N	R	A
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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