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Job DescriptionP38394
Confidence2.13%DateThu Jan 5 11:58:08 GMT 2012
Rank97Aligned Residues8
% Identity38%Templatec3qfqE_
PDB info PDB header:dna binding protein/dnaChain: E: PDB Molecule:large t antigen; PDBTitle: asymmetric assembly of merkel cell polyomavirus large t-antigen origin2 binding domains at the viral origin
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  RKYCSEAC
Query Conservation 
 


  
Alig confidence 







Template Conservation 

 

  
Template Sequence  KNFCSTFC
Template Known Secondary structure  TTT
Template Predicted Secondary structure 
Template SS confidence 







   385....390..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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