Job Description P09030 Confidence 99.95% Date Thu Jan 5 11:01:48 GMT 2012 Rank 16 Aligned Residues 241 % Identity 17% Template c3i46B_ PDB info PDB header:toxin Chain: B: PDB Molecule:beta-hemolysin; PDBTitle: crystal structure of beta toxin from staphylococcus aureus f277a,2 p278a mutant with bound calcium ions Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	F	V	S	F	N	I	N	G	L	.	.	.	.	.	.	.	.	.	.	R	A	R	P	H	Q	L	E	A	I	V	E	K	H	Q	P	D	V	I	G	L	Q	E	T	K	V	H	D	D	M	F	P	L	E	E	V	A	K	L	G	Y	N	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	V	S	H	N	V	Y	M	L	S	T	V	L	Y	P	N	W	G	Q	Y	K	R	A	D	L	I	G	Q	S	S	Y	I	K	N	N	D	V	V	I	F	N	E	A	F	D	N	G	A	S	D	K	L	L	S	N	V	K	K	E	Y	P	Y	Q	T	P	V	L	G	R	S	Q	S	G	W	D	K	T	E
Template Known Secondary structure														T	T	T		T	T	S											T		S	T	T	S	S		S																				T	T	T	T								T	T	S		S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
					56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																												.	.	.	.																															.	.
Query SS confidence		.	.	.																												.	.	.	.																															.	.
Query Sequence		.	.	.	Y	H	G	Q	K	G	H	Y	G	V	A	L	L	T	K	E	T	P	I	A	V	R	R	G	F	P	G	.	.	.	.	D	D	E	E	A	Q	R	R	I	I	M	A	E	I	P	S	L	L	G	N	V	T	V	I	N	G	Y	F	P	Q	.	.	G	E	S	R	D	H	P	I	K	F	P	A	K	A
Query Conservation		.	.	.																												.	.	.	.																															.	.
Alig confidence		.	.	.																												.	.	.	.																															.	.
Template Conservation
Template Sequence		G	S	Y	S	S	T	V	A	E	D	G	G	V	A	I	V	S	K	Y	P	I	K	E	K	I	Q	H	V	F	K	S	G	C	G	F	D	N	D	S	N	K	G	F	V	Y	T	K	I	E	K	N	G	K	N	V	H	V	I	G	T	H	T	Q	S	E	D	S	R	C	G	A	G	H	D	R	K	I	R	A	E
Template Known Secondary structure						S	S		S	S									S	S											S				T	G	G	G	T	S												T	T															T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	Y	Q	N	L	Q	N	Y	L	E	T	E	L	K	R	D	N	P	V	L	I	M	G	D	M	N	I	S	P	T	D	L	D	I	G	I	G	E	E	N	R	K	R	W	L	R	T	G	K	C	S	F	L	P	E	E	R	E	W	M	D	R	L	M	S	W	G	L	V	D	T	F	R	H	A	N	P	Q	T
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	M	K	E	I	S	D	F	V	K	K	K	N	I	P	K	D	E	T	V	Y	I	G	G	D	L	N	V	N	K	G	T	P	E	F	K	D	M	L	K	N	L	N	V	N	D	V	L	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	S
Template Known Secondary structure													T	T			T	T	S												T	T	S											T	B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																											.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.														.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	R	F	S	W	F	D	Y	R	S	K	G	F	D	D	N	R	G	L	R	I	D	L	L	L	A	S	Q	P	L	A	E	C	C	V	E	T	G	I	D	Y	E	I	R	S	M	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	D	H	A	P	V	W	A	T	F	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	D	P	Q	S	N	S	I	A	K	Y	N	Y	P	N	G	K	P	E	H	L	D	Y	I	F	T	D	K	D	H	K	Q	P	K	Q	L	V	N	E	V	V	T	E	K	P	K	P	W	D	V	Y	A	A	A	Y	Y	Y	V	Y	N	D	F	S	D	H	Y	P	I	K	A	Y	S	K
Template Known Secondary structure		S	B		T	T	T									S	S				B								B	T	T	S				S	S											S							S	S								S		S	B
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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