Job Description P09030 Confidence 100.00% Date Thu Jan 5 11:01:48 GMT 2012 Rank 3 Aligned Residues 255 % Identity 36% Template c2jc4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	F	V	S	F	N	I	N	G	L	R	A	R	P	H	Q	L	E	A	I	V	E	K	H	Q	P	D	V	I	G	L	Q	E	T	K	V	H	D	D	M	F	P	L	E	E	V	A	K	L	G	Y	N	V	F	Y	H	G	Q	K	G	H	Y	G	V	A	L	L	T	K	E	T	P	I	A	V	R	R	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	I	T	T	W	N	V	N	S	L	N	V	R	L	P	Q	V	Q	N	L	L	A	D	N	P	P	D	I	L	V	L	Q	E	L	K	L	D	Q	D	K	F	P	A	A	A	L	Q	M	M	G	W	H	C	V	W	S	G	Q	K	T	Y	N	G	V	A	I	V	S	R	S	V	P	Q	D	V	H	F	G	L
Template Known Secondary structure										S															S	S			S									S		G	G	G	S							T	T	T									S	S	S								S	S								S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	D	E	E	A	Q	R	R	I	I	M	A	E	I	P	S	L	L	G	N	V	T	V	I	N	G	Y	F	P	Q	G	E	S	R	D	H	P	I	K	F	P	A	K	A	Q	F	Y	Q	N	L	Q	N	Y	L	E	T	E	L	K	R	D	N	P	V	L	I	M	G	D	M	N	I	S	P	T	D	L	D
Query Conservation
Alig confidence																			.	.	.	.																			.
Template Conservation																			.	.	.	.																			.
Template Sequence		P	A	L	P	D	D	P	Q	R	R	V	I	A	A	T	V	S	.	.	.	.	G	V	R	V	I	N	V	Y	C	V	N	G	E	A	L	D	S	P	.	K	F	K	Y	K	E	Q	W	F	A	A	L	T	E	F	V	R	D	E	M	T	R	H	G	K	L	V	L	L	G	D	F	N	I	A	P	A	D	A	D
Template Known Secondary structure		T	T	S	T	T			S									T	.	.	.	.	T													S	T	T	S		.																					T	T		S	S												S	G	G	G
Template Predicted Secondary structure																			.	.	.	.																			.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	G	E	E	N	R	K	R	W	L	R	T	G	K	C	S	F	L	P	E	E	R	E	W	M	D	R	L	M	S	W	G	L	V	D	T	F	R	H	A	N	P	Q	T	A	D	R	F	S	W	F	D	Y	R	S	K	G	F	D	D	N	R	G	L	R	I	D	L	L	L	A	S	Q	P	L	A	E	C
Query Conservation
Alig confidence					.	.	.	.	.	.																																			.
Template Conservation					.	.	.	.	.	.																																			.
Template Sequence		C	Y	D	.	.	.	.	.	.	P	E	K	W	H	E	K	I	H	C	S	S	V	E	R	Q	W	F	Q	N	L	L	D	L	G	L	T	D	S	L	R	Q	V	H	.	P	E	G	A	F	Y	T	W	F	D	Y	R	G	A	M	F	Q	R	K	L	G	L	R	I	D	H	I	L	V	S	P	A	M	A	A	A
Template Known Secondary structure		B	S	S	.	.	.	.	.	.	G	G	G	G	T	T		T	T	S													T	T	T										.		S	S					B			T	T	T	T					T			B													T	T
Template Predicted Secondary structure					.	.	.	.	.	.																																			.
Template SS confidence
		156	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	E	T	G	I	D	Y	E	I	R	S	M	E	K	P	S	D	H	A	P	V	W	A	T	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	D	V	R	V	D	L	E	T	R	A	L	E	R	P	S	D	H	A	P	V	T	A	E	F	D
Template Known Secondary structure													T	S	S	S			S	B
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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