 |
Job Description | P52007 | Confidence | 10.90% | Date | Thu Jan 5 12:04:55 GMT 2012 |
Rank | 86 | Aligned Residues | 42 |
% Identity | 12% | Template | d1ig6a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| ARID-like
| ARID domain
|
Resolution | UNK |
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | H | Q | N | A | T | A | E | R | W | R | R | G | F | E | Q | C | G | E | L | L | S | E | N | M | . |
I | N | G | R | P | I | C | L | F | K | L | H | E | P | V | Q |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|   | . |
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |
Template Sequence |   |
R | A | D | E | Q | A | F | L | V | A | L | Y | K | Y | M | K | E | R | K | T | P | I | E | R | I | P | Y | L | G | F | K | Q | I | N | L | W | T | M | F | Q | A | A | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| G | G | G |
|
|
| S | S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|