|   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | A | H | F | C | S | V | W | R | K | K | N | V | L | N | N | L | W | A | A | P | L | L | V | L | Y | R | I | I | T | E | C | F | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | Y | E | I | Q | A | A | A | T | I | G | R | R | F | T | I | H | H | G | Y | A | V | V | I | N | K | N | V | V | A | G |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |
Template Sequence |   |
D | R | L | R | A | R | Q | L | I | H | R | Y | N | H | S | L | A | E | E | H | T | L | R | Q | Q | I | L | A | D | L | F | G | Q | V | T | E | A | Y | I | E | P | T | F | R | C | D | Y | G | Y | N | I | F | L | G | N | N | F | F | A | N | F | D | C | V | M | L | D | V | C | P | I | R | I | G | D | N | C | M | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | S | S | B |
| S | S |  |  |  |
| S |
|  |  |  | S | S | S | T | T |  |  |  |
| S | S |  |  |  |
| S | S |  |  |  |  |
| S | S |
|  |  |  |
| T | T |
|  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | F | T | I | R | H | G | V | T | I | G | N | R | G | A | D | N | M | . |
. |
. |
. |
. |
A | C | P | H | I | G | N | G | V | E | L | G | A | N | V | I | I | L | G | D | I | T | L | G | N | N | V | T | V | G | A | G | S | V | V | L | D | S | V | P | D | N | A | L | V | V | G | E | K | A | R | V | K | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|
|   |   |
|   |
|
|   |   |
|   |
|   |   |   |
|   |
|
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|   |   |   |
|   |   |
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |
|   |
|   |
|
|
|   |
|
|
Template Sequence |   |
P | G | V | H | I | Y | T | A | T | H | P | I | D | P | V | A | R | N | S | G | A | E | L | G | K | P | V | T | I | G | N | N | V | W | I | G | G | R | A | V | I | N | P | G | V | T | I | G | D | N | V | V | V | A | S | G | A | V | V | T | K | D | V | P | D | N | V | V | V | G | G | N | P | A | R | I | I | K |
Template Known Secondary structure |   |
T | T |
|  |  |  |
|  |  |
|
| S | S |  |  |  |  | T | T | T |
| B |  |  |
|
|  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S |
| B |
| S | S |  |  |  |  | T | T | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |