Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACC9
Confidence99.95%DateThu Jan 5 11:17:55 GMT 2012
Rank8Aligned Residues139
% Identity21%Templated1ocxa_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50...... ...60.........70.........80.......
Predicted Secondary structure 



..............



















Query SS confidence 


































. . . . . . . . . . . . . .






























Query Sequence  RVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFF. . . . . . . . . . . . . . GYEIQAAATIGRRFTIHHGYAVVINKNVVAG
Query Conservation 
                                  ..............
  

    

    
     
 

    

Alig confidence 


































..............






























Template Conservation          
   
            
            
        
  
 

    
     
     
 

    
 
Template Sequence  DRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLA
Template Known Secondary structure  S
TT
SSB
SS
S
SSSTT
SS
SS
SS

TT

Template Predicted Secondary structure 

































Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   88.90.........100...... ...110.........120.........130.........140.........150.........160
Predicted Secondary structure 










.....































Query SS confidence 


















. . . . .





















































Query Sequence  DDFTIRHGVTIGNRGADNM. . . . . ACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
Query Conservation      
              .....    

  
 

  
 
   
 

   



 


  


   
  
 



  
Alig confidence 


















.....





















































Template Conservation      
                     
 

    

    
  

 

    






  


    
 
 


 

Template Sequence  PGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIK
Template Known Secondary structure  TT



SSTTT
B


TT

TT

TT

TT

TT

S
B
SSTTTT
Template Predicted Secondary structure 













































Template SS confidence 













































































   104.....110.........120.........130.........140.........150.........160.........170.........180.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions