Email l.a.kelley@imperial.ac.uk Description P32051 Date Wed Jan 25 15:20:49 GMT 2012 Unique Job ID 0527998f3d42f5f7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1dcea2 21.0 57 Fold:C2 domain-like Superfamily:Rab geranylgeranyltransferase alpha-subunit, insert domain Family:Rab geranylgeranyltransferase alpha-subunit, insert domain 2 c2vxaL_ 16.4 14 PDB header:flavoprotein Chain: L: PDB Molecule:dodecin; PDBTitle: h.halophila dodecin in complex with riboflavin 3 c2pe4A_ 15.8 44 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis 4 d1b26a2 11.9 31 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 5 d1u46a_ 11.6 12 Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Protein kinases, catalytic subunit 6 d1euza2 10.9 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 7 c2atmA_ 10.8 38 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure of the recombinant allergen ves v 2 8 c3oqtP_ 10.6 63 PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis 9 c2hw2A_ 10.6 80 PDB header:transferase Chain: A: PDB Molecule:rifampin adp-ribosyl transferase; PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin 10 d1bvua2 10.5 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 11 c2vagA_ 10.1 12 PDB header:transferase Chain: A: PDB Molecule:dual specificity protein kinase clk1; PDBTitle: crystal structure of di-phosphorylated human clk1 in2 complex with a novel substituted indole inhibitor 12 d1wv8a1 10.1 24 Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA1013-like 13 c3s2xB_ 9.9 50 PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain 14 d1hwxa2 9.7 13 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 15 d1gxya_ 9.4 25 Fold:ADP-ribosylation Superfamily:ADP-ribosylation Family:Ecto-ART 16 d1iq9a_ 9.3 13 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 17 d1gtma2 9.2 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 18 d2hlya1 8.9 86 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Atu2299-like 19 d1bgva2 8.8 38 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 20 d1ntxa_ 8.6 19 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 21 c3igmA_ not modelled 8.5 33 PDB header:transcription/dna Chain: A: PDB Molecule:pf14_0633 protein; PDBTitle: a 2.2a crystal structure of the ap2 domain of pf14_0633 from p.2 falciparum, bound as a domain-swapped dimer to its cognate dna 22 d1v9la2 not modelled 8.3 31 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 23 d1qu3a1 not modelled 8.2 44 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 24 c3fgrB_ not modelled 8.1 43 PDB header:hydrolase Chain: B: PDB Molecule:putative phospholipase b-like 2 40 kda form; PDBTitle: two chain form of the 66.3 kda protein at 1.8 angstroem 25 d1jq4a_ not modelled 8.0 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 26 d1jgka_ not modelled 7.8 6 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 27 d2byca1 not modelled 7.7 11 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:BLUF domain 28 d2cqha1 not modelled 7.5 60 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 29 d1cm7a_ not modelled 7.5 25 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 30 d1uvqb2 not modelled 7.3 22 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 31 c4a1dH_ not modelled 7.3 23 PDB header:ribosome Chain: H: PDB Molecule:rpl35a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4. 32 c3izcj_ not modelled 7.2 30 PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein rpl12 (l11p); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 33 c2zxeB_ not modelled 6.9 60 PDB header:hydrolase/transport protein Chain: B: PDB Molecule:na+,k+-atpase beta subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 34 d1drsa_ not modelled 6.9 50 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Dendroaspin 35 c1p0lA_ not modelled 6.8 33 PDB header:ribosome Chain: A: PDB Molecule:19-mer peptide from 50s ribosomal protein l1; PDBTitle: hp (2-20) substitution gln to trp modification in sds-d252 micelles 36 d1l1fa2 not modelled 6.8 13 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 37 c3kdpD_ not modelled 6.7 40 PDB header:hydrolase Chain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1; PDBTitle: crystal structure of the sodium-potassium pump 38 c1hrdA_ not modelled 6.6 38 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: glutamate dehydrogenase 39 c1v9lA_ not modelled 6.6 31 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad 40 d1j0ga_ not modelled 6.5 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:BM-002-like 41 c2jp2A_ not modelled 6.4 18 PDB header:signaling protein Chain: A: PDB Molecule:sprouty-related, evh1 domain-containing protein PDBTitle: solution structure and resonance assignment of the n-2 terminal evh1 domain from the human spred2 protein3 (sprouty-related protein with evh1 domain isoform 2) 42 c1bvuF_ not modelled 6.4 21 PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis 43 c3g2bA_ not modelled 6.4 5 PDB header:biosynthetic protein Chain: A: PDB Molecule:coenzyme pqq synthesis protein d; PDBTitle: crystal structure of pqqd from xanthomonas campestris 44 c2kt9A_ not modelled 6.3 38 PDB header:ribosomal protein Chain: A: PDB Molecule:probable 30s ribosomal protein psrp-3; PDBTitle: solution nmr structure of probable 30s ribosomal protein2 psrp-3 (ycf65-like protein) from synechocystis sp. (strain3 pcc 6803), northeast structural genomics consortium target4 target sgr46 45 c1nr1A_ not modelled 6.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase 1; PDBTitle: crystal structure of the r463a mutant of human glutamate2 dehydrogenase 46 d1ajka_ not modelled 6.3 13 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolases family 16 47 d2r99a1 not modelled 6.2 23 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:Cyclophilin (peptidylprolyl isomerase) 48 d1wxsa1 not modelled 6.2 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:BM-002-like 49 d1vb0a_ not modelled 6.1 12 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 50 d1evha_ not modelled 6.0 27 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Enabled/VASP homology 1 domain (EVH1 domain) 51 d2ux9a1 not modelled 6.0 17 Fold:Dodecin subunit-like Superfamily:Dodecin-like Family:Dodecin-like 52 d2nnab2 not modelled 6.0 24 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 53 d2gc9a1 not modelled 5.9 25 Fold:Lipocalins Superfamily:Lipocalins Family:Phenolic acid decarboxylase (PAD) 54 c2zhzC_ not modelled 5.9 20 PDB header:transferase Chain: C: PDB Molecule:atp:cob(i)alamin adenosyltransferase, putative; PDBTitle: crystal structure of a pduo-type atp:cobalamin adenosyltransferase2 from burkholderia thailandensis 55 d1fcqa_ not modelled 5.7 50 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Bee venom hyaluronidase 56 d2rmca_ not modelled 5.7 29 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:Cyclophilin (peptidylprolyl isomerase) 57 c3alzB_ not modelled 5.7 50 PDB header:viral protein/membrane protein Chain: B: PDB Molecule:cdw150; PDBTitle: crystal structure of the measles virus hemagglutinin bound to its2 cellular receptor slam (form i) 58 c3aogA_ not modelled 5.6 31 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) 59 d1w8ma_ not modelled 5.6 23 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:Cyclophilin (peptidylprolyl isomerase) 60 d3ebxa_ not modelled 5.5 13 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 61 c2qyzA_ not modelled 5.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the uncharacterized protein ctc02137 from2 clostridium tetani e88 62 c3gitA_ not modelled 5.5 50 PDB header:transferase Chain: A: PDB Molecule:carbon monoxide dehydrogenase/acetyl-coa synthase subunit PDBTitle: crystal structure of a truncated acetyl-coa synthase 63 d2pxyd2 not modelled 5.4 24 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 64 c2yfqA_ not modelled 5.4 7 PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus 65 c3izbD_ not modelled 5.4 16 PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein rps4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 66 d1ktdb2 not modelled 5.4 26 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 67 d2hrva_ not modelled 5.4 19 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 68 c3aoeC_ not modelled 5.3 23 PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) 69 d2i1sa1 not modelled 5.3 14 Fold:MM3350-like Superfamily:MM3350-like Family:MM3350-like 70 d1c8za_ not modelled 5.2 30 Fold:Tubby C-terminal domain-like Superfamily:Tubby C-terminal domain-like Family:Transcriptional factor tubby, C-terminal domain 71 d1lmia_ not modelled 5.2 44 Fold:Immunoglobulin-like beta-sandwich Superfamily:Antigen MPT63/MPB63 (immunoprotective extracellular protein) Family:Antigen MPT63/MPB63 (immunoprotective extracellular protein) 72 d1cnza_ not modelled 5.2 25 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 73 d1mujb2 not modelled 5.2 29 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 74 c3dy0B_ not modelled 5.2 23 PDB header:blood clotting, hydrolase inhibitor Chain: B: PDB Molecule:c-terminus plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved pci bound to heparin 75 d1mvka_ not modelled 5.2 50 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 76 c3fbxA_ not modelled 5.1 43 PDB header:hydrolase Chain: A: PDB Molecule:putative phospholipase b-like 2; PDBTitle: crystal structure of the lysosomal 66.3 kda protein from mouse solved2 by s-sad 77 d1i3rb2 not modelled 5.1 26 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 78 d2esla1 not modelled 5.1 31 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:Cyclophilin (peptidylprolyl isomerase) 79 c1lq8H_ not modelled 5.1 23 PDB header:blood clotting Chain: H: PDB Molecule:plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved protein c inhibitor