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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3gitA_

Fold library idPDB HeaderMoleculeTitle
c3gitA_PDB header: transferaseChain: A: PDB Molecule: carbon monoxide dehydrogenase/acetyl-coa synthasePDBTitle: crystal structure of a truncated acetyl-coa synthase


Added to library: Sat Aug 28 17:23:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLG
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Known secondary structure (DSSP)




SS
BSGGGTT



GGGTTTS


GGG

TT
S

TTSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEE
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Known secondary structure (DSSP)
TT

GGGTBTTTTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERV
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Known secondary structure (DSSP)
TTT
S
STT

STT
S
GGGGTSTT

BTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSC
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Known secondary structure (DSSP)
TTS



TTSS

STTTTTTS





TT
SSSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence GCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIA
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Known secondary structure (DSSP) S

SGGGTTT

S

TTSS

SS


TT
GGGGGSTTTTGGGTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence RIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSR
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Known secondary structure (DSSP) G

TTS
TTSB
TTT
SST
GGGGS

GGGG


S
 ..
Sequence GH
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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