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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3kdpD_

Fold library idPDB HeaderMoleculeTitle
c3kdpD_PDB header: hydrolaseChain: D: PDB Molecule: sodium/potassium-transporting atpase subunitPDBTitle: crystal structure of the sodium-potassium pump


Added to library: Sat Aug 28 16:45:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQSQKTE
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Known secondary structure (DSSP)




SSS
SS
S

GGGS
S
SSS
S

TTT
S



BSS

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGERKVCRSRLEWLG
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Known secondary structure (DSSP)

SS
TTTTTT

TTTS
STTT


SS








SSSSSSS




GGGST
 .........150.........160.........170.........180.........190.........200.........210
Sequence NCSGLNDETYGYKDGKPCVIIKLNRVLGFKPKPPKNESLETYPVMKYNPYVLPVHCTGKRDEDKEKVGTM
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Known secondary structure (DSSP) TS



SSS



SSS

B
B




BT






SSS
SS
SSS

TTTB

SSSSS






B
 .........220.........230.........240.........250.........260.........270.........280
Sequence EYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENIGYSEKDRFQGRFDV
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Known secondary structure (DSSP)



TTS
SS
BTTS
SB
TTTS
TT






B
B

S

S



B
STT



SS
TTTTS

B
 ......
Sequence KIEVKS
Predicted secondary structure

SS confidence





Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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