Job Description P0AD27 Confidence 5.15% Date Wed Jan 25 15:20:24 GMT 2012 Rank 72 Aligned Residues 190 % Identity 11% Template c3rceA_ PDB info PDB header:transferase/peptide Chain: A: PDB Molecule:oligosaccharide transferase to n-glycosylate proteins; PDBTitle: bacterial oligosaccharyltransferase pglb Resolution 3.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	S	W	G	H	W	F	A	L	F	N	I	L	L	S	L	V	I	G	S	R	Y	L	F	I	A	D	W	P	T	T	L	A	G	R	I	Y	S	Y	V	S	I	I	G	H	F	S	F	L	V	F	A	T	Y	L	L	I	L	F	P	L	T	F	I	V	G	S	Q	R	L	M	R	F	L	S	V	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	W	Y	P	S	S	Y	S	L	N	F	A	M	I	G	L	F	G	L	Y	T	L	V	F	H	R	K	E	K	I	F	Y	L	A	I	A	L	M	I	I	A	L	S	M	L	A	W	Q	Y	K	L	A	L	I	V	L	L	F	A	I	F	A	F	K	E	E	K	I	N	F	Y	M	I	W	A	L	I	F	I
Template Known Secondary structure				S		G	G	G																				T	T																S																					S	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		95	.	.	.																																						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	L	I	D	S	E	V	F	T	R	F	H	L	H	L	N	P	I	V	W	Q	L	V	I	N	P	D	E	N	E	M	A	R	D	W	Q	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	S	I	L	H	L	S	G	G	A	F	M	Y	F	N	V	N	E	T	I	M	E	V	N	T	I	D	P	E	V	F	M	Q	R	I	S	S	S	V	L	V	F	I	L	S	F	I	G	F	I	L	L	C	K	D	H	K	S	M	L	L	A	L	P	M	L	A	L	G	F	M	A	L	R	A	G	L	R	F
Template Known Secondary structure																		T	T	T	T		G	G	G														S	S																T	T	T	S	S	G	G	G	G															G	G	G
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	I	S	V	P	V	I	L	L	L	E	L	V	F	A	T	W	S	W	Q	K	L	R	S	L	T	R	R	R	R	F	A	R	P	L	A	A	F	L	F	I	A	F	I	A	S	H	V	V	Y	I	W	A	D	A	N	F	Y	R	P	I	T	M	Q	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	Y	A	V	P	V	M	A	L	G	F	G	Y	F	L	Y	A	F	F	N	F	L	E	K	K	Q	I	K	L	S	L	R	N	K	N	I	L	L	I	L	I	A	F	F	S	I	S	P	A	L	M	H	I	Y	Y	Y	K	S	S	T	V	F	T	S	Y	E
Template Known Secondary structure		G	G	G	G																						S	S																																			S	S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions