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Job DescriptionP0AD27
Confidence100.00%DateWed Jan 25 15:20:24 GMT 2012
Rank16Aligned Residues263
% Identity20%Templatec3q3qA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alkaline phosphatase; PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270..... ....280.........290.........300 .........310.........320..
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Query Sequence  RYRDMGTGQNVLLITVDGLNYSRF. . . . EKQMPALAGFAEQNISFTRHMSSGN. . TTDNGIFGLFYGISPSYMDGIL. . .
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Template Sequence  RSIAATPPKLIVAISVDQFSADLFSEYRQYYTGGLKRLTSEGAVFPRGYQSHAATETCPGHSTILTGSRPSRTGIIANNW
Template Known Secondary structure 

TTSS

STT

GGG

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SS
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   323......330.........340.........350...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STRTPAALITALNQQGYQLGLFSSDGFTSPL. . . . . . . . . . . . . . . . .
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Template Sequence  FDLDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPATRVVSVAGKDRAAIMMGGATADQVWWLGGP
Template Known Secondary structure 
TT
SSS

TTB
TTSTT
BTTB

B
STT

S


TT

SS
TT
S
ST
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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   354.....360.........370.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YRQALLSDFSMPSVRTQSDEQTAT
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Template Conservation                                                                                  
Template Sequence  QGYVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNRTVGTGRFARDAGDYKGFRISPEQDAMTLA
Template Known Secondary structure  T

STT



TS
B





GGGGGG


TTS




B
TT
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   193......200.........210.........220.........230.........240.........250.........260.........270..
 
   378.380..... ....390.........400.........410.........420.........430.........440.........450..
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Query Sequence  QWINWLGR. . YAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRG. . .
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Template Sequence  FAAAAIENMQLGKQAQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKDG. . IDYVVVLTADHGGHD
Template Known Secondary structure  TTTTSSSS


SSSTT..


S




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   273......280.........290.........300.........310.........320.........330..... ....340.........350
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                   
                              
Template Sequence  LPERHRMNAMPMEQRVDMALTPKALNATIAEKAGLPGKKVIWSDGPSGDIYYDKGLTAAQRARVETEALKYLRAHPQVQT
Template Known Secondary structure 
TTTT
TT


GGGST
TTS

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TT

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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   453......460.........470.........480
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IPLSEEEETFDWSHGHLQVPLVIHWPGT
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Template Sequence  VFTKAEIAATPSPSGPPESWSLIQEARASFYPSRSGDLLLLLKPRVMSIPEQAVMGSVATHGSPWDTDRRVPILFWRKGM
Template Known Secondary structure  TS



S
GGG

T

TTTS
S
TTSS


SS
S






SSTT
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   431........440.........450.........460.........470.........480.........490.........500.........510
 
   481........490.........500.........510........
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Query Sequence  PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDL
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Template Sequence  QHFEQPLGVETVDILPSLA. ALIKLPVPKDQ. IDGRCL
Template Known Secondary structure 



S
GGG.TT



GGG.
S



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   511........520......... 530.........540 ......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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