Job Description P0AD27 Confidence 100.00% Date Wed Jan 25 15:20:24 GMT 2012 Rank 2 Aligned Residues 349 % Identity 16% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																														.	.	.	.	.
Query SS confidence																											.																														.	.	.	.	.
Query Sequence		D	A	Q	E	Y	Q	R	R	L	I	E	Q	G	N	P	D	A	V	S	V	Q	Y	P	L	S	.	E	L	R	Y	R	D	M	G	T	G	Q	N	V	L	L	I	T	V	D	G	L	N	Y	S	R	F	E	K	Q	.	.	.	.	.	M	P	A	L	A	G	F	A	E	Q	N	I	S	F	T	R	H	M	S	S
Query Conservation																											.																														.	.	.	.	.
Alig confidence																											.																														.	.	.	.	.
Template Conservation
Template Sequence		N	Q	K	X	L	D	L	V	R	A	S	S	T	K	I	D	F	D	P	T	L	L	P	T	X	N	S	N	P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	G	L	P	L	T	P	N	L	D	E	L	X	Q	E	G	W	Q	F	T	Q	X	Y	A	T
Template Known Secondary structure																S		B		T	T	T	S	T	T							S			S	S										T	T			G	G	G		G	G	G	T	S		S										T	T	S				T	T				S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.														.	.	.	.	.	.	.	360	.
Predicted Secondary structure																										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	T	T	D	N	G	I	F	G	L	F	Y	G	I	S	P	S	Y	M	D	G	I	L	.	.	.	.	S	T	R	T	P	A	A	L	I	T	A	L	N	Q	Q	G	Y	Q	L	G	L	F	S	S	D	G	F	T	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	R	Q	A	L	L	S	D
Query Conservation																										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	R	S	V	R	G	I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V	K	L	S	K	S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	G	F	D	Q	I	V	E	E	K	N	Y	T	N
Template Known Secondary structure			S	S																S	S			T	T	T		G	G	G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	T							G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.								.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.
Query Sequence		F	S	M	P	S	V	R	T	Q	S	D	E	Q	T	A	T	Q	W	I	N	W	L	G	R	Y	A	Q	E	D	N	R	W	F	S	W	V	S	F	N	G	T	N	I	D	D	S	N	Q	Q	A	F	A	R	.	.	.	.	.	.	.	K	Y	S	R	A	A	G	N	V	D	D	Q	I	N	R	V	L	N	A	L
Query Conservation																																																							.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	F	V	G	S	W	G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	E	R	L	S	K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	E	Y	P	E	G	K	I	E	Q	Y	D	S	E	H	X	T	R	N	N	A	V	K	Y	S	D	Y	A	L	G	T	F	F	D	K	A
Template Known Secondary structure			S				T	T																				T	S	S	S										S	S	S	T	T					T	T	S	S			S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	S	G	K	L	D	N	T	V	V	I	I	T	A	G	R	G	I	P	L	S	E	E	E	E	T	F	D	W	S	H	G	H	L	Q	V	P	L	V	I	H	W	P	G	T	P	A	Q	R	I	N	A	L	T	D	H	T	D	L	M	T	T	L	M	Q	R	L	L	H	V	S	T	P	A	S	E	Y	S	Q
Query Conservation
Alig confidence																												.	.	.																																					.											.	.
Template Conservation																												.	.	.																																					.											.	.
Template Sequence		K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A	R	V	F	G	A	N	L	.	.	.	V	P	V	K	H	F	H	I	P	A	L	I	I	G	K	D	I	Q	P	R	K	D	D	R	I	A	N	N	I	D	X	P	P	T	L	L	.	S	L	I	G	V	D	A	K	T	P	.	.	X	I
Template Known Secondary structure		T	T	S	S	S	G	G	G								S			S				S		S	S	.	.	.			G	G	G	T								S	T	T												G	G	G							.				T							.	.
Template Predicted Secondary structure																												.	.	.																																					.											.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.				.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560			.	.
		515	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.			.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																														.	.
Query SS confidence											.																														.	.
Query Sequence		G	Q	D	L	F	N	P	Q	R	.	R	H	Y	W	V	T	A	A	D	N	D	T	L	A	I	T	T	P	K	K	T	L	V	L	N	N	N	G	K	.	.	Y	R	T	Y	N	L	R	G	E	R	V	K	D	E	K	P	Q	L	S	L	L	L	Q	V	L	T	D
Query Conservation											.																														.	.
Alig confidence											.																														.	.
Template Conservation
Template Sequence		G	R	D	L	T	K	P	L	A	R	E	D	E	R	A	X	X	Q	Y	D	K	N	F	G	Y	L	T	R	D	N	L	V	V	L	S	P	G	E	K	V	S	T	X	E	Y	D	F	E	S	Q	T	X	K	P	L	E	V	D	E	S	V	I	D	R	A	K	A	N
Template Known Secondary structure		S			T	T	S				G	G	G								T	T							S	S							T	T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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