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Job DescriptionP0AD27
Confidence100.00%DateWed Jan 25 15:20:24 GMT 2012
Rank9Aligned Residues323
% Identity19%Templatec3b5qB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270........ .280.........290.........300.........310...... ...320..
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Query Sequence  TGQNVLLITVDGLNYSRFEKQ. . . . . . MPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPS. . . . . . . . . YMDGIL
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Template Sequence  EKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGXXPHQTNVRSNSSEPVNTR
Template Known Secondary structure 


TT

TTTSGGGSS
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   323......330.........340.........350.. .......360.........370.........380.........390....
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Query Sequence  STRTPAALITALNQQGYQLGLFSSDGFTSP. . . . . . . . LYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWF
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Template Sequence  LPENVPTLGSLFSESGYEAVHFGKTHDXGSLRGFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYLS. . NPPKEPFI
Template Known Secondary structure 

TTS

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   94.....100.........110.........120.........130.........140.........150.........160... ......170.
 
   395....400......... 410........
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Query Sequence  SWVSFNGTNIDDSNQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QAFARKYSR
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Template Sequence  CIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRXTQAAHWNEENYRHYIAAFQH
Template Known Secondary structure 
TTTTT
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TT
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T
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   419420.........430.........440.........450........ .460.........470.........480... ......490.
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Query Sequence  AAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEE. . . EETFDWSHGHLQVPLVIHWPGTPAQ. . . . RINALTDH
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Template Sequence  YTKXVSKQVDSVLKALYSTPAGRNTIVVIXADHGDGXASHRXVTKHISFYDEXTNVPFIFAGPGIKQQKKPVDHLLTQPT
Template Known Secondary structure  TTSTTGGGS



TTGGG

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B

STT



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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   492.......500.........510......... 520.........530..... ....540.........550.. ....
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Query Sequence  TDLMTTLMQRLLHVSTPASEYSQGQDLF. . . . . . NPQRRHYWVTAADNDT. . . . . . . . LAITTPKKTLVLNNNGK. YRTY
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Template Sequence  LDLLPTLC. DLAGIAVPAE. . KAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRXVRGPRYKYTHYLEGNGEELY
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TT..





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   332....... 340......... 350.........360.........370.........380.........390.........400........
 
   557..560.........570 .........580.....
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Query Sequence  NLRGERVKDEKPQL. . . . . SLLLQVLTDEKRFIA
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Template Sequence  DXKKDPGERKNLAKDPKYSKILAEHRALLDDYIT
Template Known Secondary structure  TTT
TT




TT
GGG
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   409410.........420.........430.........440..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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