Job Description P0AD27 Confidence 100.00% Date Wed Jan 25 15:20:24 GMT 2012 Rank 8 Aligned Residues 352 % Identity 15% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.							.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.		.	300
Predicted Secondary structure																																																	.	.	.	.	.	.													.	.											.
Query SS confidence																																																	.	.	.	.	.	.													.	.											.
Query Sequence		Q	R	R	L	I	E	Q	G	N	P	D	A	V	S	V	Q	Y	P	L	S	E	L	R	Y	R	D	M	G	T	G	Q	N	V	L	L	I	T	V	D	G	L	N	Y	S	R	F	E	.	.	.	.	.	.	K	Q	M	P	A	L	A	G	F	A	E	Q	.	.	N	I	S	F	T	R	H	M	S	S	.	G	N
Query Conservation																																																	.	.	.	.	.	.													.	.											.
Alig confidence																																																	.	.	.	.	.	.													.	.											.
Template Conservation
Template Sequence		A	D	S	S	D	V	T	E	V	E	N	Y	X	K	A	N	Y	D	V	P	N	N	V	Y	F	G	K	A	E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q
Template Known Secondary structure				G	G	G											T						T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.															.	.	.	.	360	.	.	.
Predicted Secondary structure																							.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	D	N	G	I	F	G	L	F	Y	G	I	S	P	S	Y	M	D	G	I	.	.	.	L	S	T	R	T	P	A	A	L	I	T	A	L	N	Q	Q	G	Y	Q	L	G	L	F	S	S	D	G	F	T	S	P	L	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	L	S	D	F	S
Query Conservation																							.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	E	E
Template Known Secondary structure		T																S	S	S							T	T	S									G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.													.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	S	V	R	T	Q	S	D	E	Q	T	A	T	Q	W	I	N	W	L	G	R	Y	A	Q	E	D	N	R	W	F	S	W	V	S	F	N	G	T	N	I	D	D	S	N	Q	Q	A	F	.	.	.	.	.	.	.	.	.	.	.	.	A	R	K	Y	S	R	A	A	G	N	V	D	D	Q	I	N	R	V	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		N	T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	.	.	.	S	L	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	X	D	E	G	D	T	D	F	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q	S	I	E	Q	F	F
Template Known Secondary structure		T	B		S	S	S	B															.	.	.	T	S		S	S									S	S		T	T					B	T	T	B							S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.												.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	L	R	D	S	G	K	L	D	N	T	V	V	I	I	T	A	G	R	G	I	P	L	S	E	E	.	.	.	.	.	.	.	.	.	.	.	E	E	T	F	D	W	S	H	G	H	L	Q	V	P	L	V	I	H	W	P	G	T	P	A	Q	R	I	N	A	L	T	D	H	T	D	L	M	T	T	L	M	Q
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																																	.
Template Sequence		N	D	L	K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	V	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	.
Template Known Secondary structure							T	S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	T	S							S				G	G	G							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530			.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		R	L	L	H	V	S	T	P	A	S	E	Y	S	Q	G	Q	D	L	F	N	P	Q	R	R	H	Y	W	V	T	A	.	.	A	D	N	D	T	L	A	I	T	T	P	K	K	T	L	V	L	N	N	N	G	K	Y	R	T	Y	N	L	R	G	E	R	V	K	D	E	K	P	Q	L	S	L	L	L	Q	V	L	T
Query Conservation																																.	.
Alig confidence										.																						.	.
Template Conservation										.
Template Sequence		H	L	L	G	V	D	T	K	.	D	Y	L	X	S	G	S	D	I	L	S	K	E	H	R	E	V	I	P	F	R	N	G	D	F	I	S	P	K	Y	T	K	I	S	G	K	Y	Y	D	T	K	T	G	K	E	L	D	E	S	E	V	D	K	S	E	D	S	L	V	K	K	E	L	E	X	S	D	K	I	I	N
Template Known Secondary structure				T	T				T	.	T	S							T	T	S	T	T								T	T	S					S	S					T	T					T	T	T			B			T	T	T	S		T
Template Predicted Secondary structure										.
Template SS confidence
		532	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
			579	580	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	E	K	R	F	I	A	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	D	L	L	R	F	Y	E	P
Template Known Secondary structure			T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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