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Job DescriptionP0AD27
Confidence100.00%DateWed Jan 25 15:20:24 GMT 2012
Rank3Aligned Residues334
% Identity21%Templatec2qzuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270........ .280.........290.........300.........310.........320...
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Query Sequence  LRYRDMGTGQNVLLITVDGLNYSRFEKQ. . . . . . MPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILS.
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Template Sequence  LQAQEKQPTPNLVFIXADQYRGDAIGCIGKEPVKTPHLDKLASEGINFTNAISSYPVSSPARGXLXTGXYPIGSKVTGNC
Template Known Secondary structure 
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SS
TT

TT

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TSTT
B
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   324.....330.........340.........350...
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Query Sequence  . . . . . . . . . . . TRTPAALITALNQQGYQLGLFSSDGFTSPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NSETAPYGVELSQNARCWSDVLKDQGYNXGYIGKWHLDAPYKPYVDTYNNRGKVAWNEWCPPERRHGFDHWIAYGTYDYH
Template Known Secondary structure  STTTGGGT
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SS

SSGGGSSS







GGGSTT

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T
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   354.....360.........370.........380.........390.........400.........410.
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Query Sequence  . . . . YRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQA. . . . . . . . . . . . . . . . . .
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Template Sequence  LKPXYWNTTAPRDSFYYVNQWGPEYEASKAIEYINGQKDQKQPFALVVSXNPPHTGYELVPDRYKEIYKDLDVEALCKGR
Template Known Secondary structure  TS
B
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SS
TTTT
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TTSS
TT
S
TTTT

TTT
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   412.......420.........430.........440.........450.........460... ......470...
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Query Sequence  . . . . . . . . . . . . . . . . FARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFD. . WSHGHLQVPL
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Template Sequence  PDIPAKGTEXGDYFRNNIRNYYACITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICXGAHENAGKDIFYEESXRIPX
Template Known Secondary structure  TTS

TTSTT
STT
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   474.....480.. .......490.........500.........510......... 520.........530...... ...
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Query Sequence  VIHWPGTPA. . QRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLF. . . . . . NPQRRHYWVTAADNDTL. . . . . . AIT
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Template Sequence  ILSWPDQIKPRKSDPLXIAFADLYPTLL. SXXGFSKEIPETVQTFDLSNEVLTGKNKKDLVQPYYFVKFDNHATGYRGLR
Template Known Secondary structure 
TTT






BGGG.TT
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TT

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   339340.........350.........360...... ...370.........380.........390.........400.........410.......
 
   540.........550. ........560........ .570.........580.....
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Query Sequence  TPKKTLVLNNNG. . . . KYRTYNLRGERVKDEKP. . . QLSLLLQVLTDEKRFIA
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Template Sequence  TDRYTYAVHATDGKIDNVILFDRTNDPHEXNNIASQQLKLTHTFNRQLKTWLE
Template Known Secondary structure 
SSTTTTT
TT




GGG
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   418.420.........430.........440.........450.........460.........470
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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