Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD27
Confidence99.46%DateWed Jan 25 15:20:24 GMT 2012
Rank26Aligned Residues242
% Identity21%Templatec2iucB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270. ........280.........290...... ...300.........310... ......320.......
Predicted Secondary structure 






......












.






..













Query SS confidence 














. . . . . .
























.
















. .













Query Sequence  GTGQNVLLITVDGLN. . . . . . YSRFEKQMPALAGFAEQNISFTRHM. SSGNTTDNGIFGLFYGI. . SPSYMDGILSTRTP
Query Conservation      


 
  

  ......       

 
  

  
  
 
  .
    
  
  
  

 ..              
Alig confidence 














......
























.
















..













Template Conservation 
 





 





    



    
          
   
 
 
  





 


 


 

 
  


       
Template Sequence  KTPKNVILLISDGAGLSQISSTFYFKSGTPNYTQFKNIGLIKTSSSREDVTDSASGATAFSCGIKTYNAAIGVADDSTAV
Template Known Secondary structure 


STB

GGGTSSSS

GGGG




SS
SS

S



TT
BSB
TTS
B
Template Predicted Secondary structure 









































Template SS confidence 















































































   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   328.330.........340.......
Predicted Secondary structure 





............................................................
Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  AALITALNQQGYQLGLFSSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    
   
   

 
      ............................................................
Alig confidence 



















............................................................
Template Conservation   

 
 

  
  





  








 

   
     

 
      






   
  
 
  

       
Template Sequence  KSIVEIAALNSIKTGVVATSSITHATPASFYAHALNRGLEEEIAMDMTESDLDFFAGGGLNYFTSRSDSKDVLAILKGNQ
Template Known Secondary structure 

TT
TTSTT

BS
TT
TTS



TS
TT


TT
Template Predicted Secondary structure 




































Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   348.350.........360.........370.........380.........390.........400.........410.....
Predicted Secondary structure  ............






































Query SS confidence  . . . . . . . . . . . .



































































Query Sequence  . . . . . . . . . . . . GFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARK
Query Conservation  ............                        
                   


        
 
          
Alig confidence  ............

















































..















Template Conservation 
                  

                
 
 


  

  
 
   





..


 

 
 
 

   
Template Sequence  FTINTTGLTDFSSIASNRKMGFLLADEAMPTMEKGRGNFLSAATDLAIQFLSKDNSAFFIMS. . EGSQIDWGGHANNASY
Template Known Secondary structure  SS



STTTTT
S
SSSS


TTTT
TTTGGG

..TTTT
Template Predicted Secondary structure 




























..








Template SS confidence 















































































   192.......200.........210.........220.........230.........240.........250... ......260.........
 
   416...420.........430.........440.........450. ........460 .........470.........
Predicted Secondary structure 








...








.............












Query SS confidence 



































. . .








. . . . . . . . . . . . .


















Query Sequence  YSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGR. . . GIPLSEEEE. . . . . . . . . . . . . TFDWSHGHLQVPLVIHWPG
Query Conservation 
   
 
 
  

  
  

     





 



...
        .............          




  
 
Alig confidence 






















...









...








.............


















Template Conservation   
 
   

 

  
        ...










 

                       
  

   


 
 


Template Sequence  LISEINDFDDAIGTALAFAKSDG. . . NTLVIVTSDHETGGFTLAAKSNKSEYSDYTEIGPTFSTGGHSATLIPVFAYGPG
Template Known Secondary structure  S...S
S
TT
B






B
S
SS


STT
Template Predicted Secondary structure 


...




































Template SS confidence 















































































   270.........280.........290.. .......300.........310.........320.........330.........340......
 
   480.........490.........500......
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  TPAQRINALTDHTDLMTTLMQRLLHVS
Query Conservation            
  

 



  
 
  
Alig confidence  ..

















.





Template Conservation  ..
  
 
  


 
   
 . 

   
Template Sequence  . . SEEFIGIYENNEIFHKIL. KVTKWN
Template Known Secondary structure  ..GGGG
TT.T

Template Predicted Secondary structure  ..




.


Template SS confidence 


























   351........360........ .370....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions