Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD27
Confidence4.26%DateWed Jan 25 15:20:24 GMT 2012
Rank89Aligned Residues37
% Identity8%Templatec1ej6D_
PDB info PDB header:virusChain: D: PDB Molecule:sigma2; PDBTitle: reovirus core
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   435....440.........450.........460.........470.........
Predicted Secondary structure 






























Query SS confidence 












































Query Sequence  RDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPG
Query Conservation 
     





 




                  




  
 
Alig confidence 



























........








Template Conservation    

 
 
  

  
  
 
        ........     


 
Template Sequence  NRRGDAAEVWILSCSLNHSAQIRPGNRS. . . . . . . . LFVMPTSPD
Template Known Secondary structure  TTTTSSS



S
B



SS........
SGG
Template Predicted Secondary structure 





















........



Template SS confidence 












































   242.......250.........260......... 270........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions