Job Description P31448 Confidence 3.08% Date Thu Jan 5 11:47:39 GMT 2012 Rank 39 Aligned Residues 213 % Identity 15% Template d1j4na_ SCOP info Aquaporin-like Aquaporin-like Aquaporin-like Resolution 2.20

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		276	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		A	E	G	Q	K	G	A	L	L	T	A	V	L	.	K	M	L	D	P	L	V	L	V	L	P	G	L	I	A	F	H	L	Y	Q	D	L	P	K	A	D	M	A	Y	P	T	L	V	N	N	V	L	P	V	P	M	V	G	F	F	G	A	V	L	F	G	A	V	I	S	T	F	N	G	F	L	N	S	A	S	T
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		S	E	F	K	K	K	L	F	W	R	A	V	V	A	E	F	L	A	M	I	L	F	I	F	I	S	I	G	S	A	L	G	F	H	Y	P	I	K	S	N	Q	T	T	G	A	V	Q	D	N	V	K	V	S	L	A	F	G	L	S	I	A	T	L	A	Q	S	V	G	H	I	S	G	A	H	L	N	P	A	V	T
Template Known Secondary structure		S	T	T																													G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.													.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	S	M	G	I	Y	R	R	I	I	N	Q	N	A	E	P	Q	Q	L	V	T	V	G	R	K	F	G	F	F	I	A	I	V	S	V	L	V	A	P	W	I	A	N	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Q	G	L	Y	S	W	M	K	Q	L	N	G	I	Y	N	V	P	L	V	T	I	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.													.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.													.	.
Template Sequence		L	G	L	.	.	.	.	.	.	L	L	S	C	Q	I	S	V	L	R	A	I	.	.	M	Y	I	I	A	Q	C	V	G	A	I	V	A	T	A	I	L	S	G	I	T	S	S	L	P	D	N	S	L	G	L	N	A	L	A	P	G	V	N	S	G	Q	G	L	G	I	E	I	I	G	T	L	Q	L	V	L	C
Template Known Secondary structure					.	.	.	.	.	.			T	T	S	S							.	.																					T	T	T		T	T			T	T						T	T			T	T	G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.													.	.
Template SS confidence
		83	.	.							.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.																					.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	G	F	F	F	P	R	I	P	A	L	A	A	K	V	A	M	G	I	G	I	I	S	Y	I	T	I	N	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	F	D	F	H	F	L	Y	V	L	A	C	T	F	C	I	N	V	V	V	M	L	V	I	G	F	I	K
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	A	T	T	D	R	R	R	R	D	L	G	G	S	G	P	L	A	I	G	F	S	V	A	L	G	H	L	L	A	I	D	Y	T	G	C	G	I	N	P	A	R	S	F	G	S	S	V	I	T	H	N	F	Q	D	H	W	I	F	W	V	G	P	F	I	G	A	A	L	A	V	L	I	Y	D	F	I	L	A
Template Known Secondary structure						T		S	S						S																																					T	T			T	T	T	T																			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	A	T	P	F	T	F	K	D	A	F	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	S	S	D	L	T	D	R	V	K	V	W	T
Template Known Secondary structure				S	S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions