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Job DescriptionP31448
Confidence16.97%DateThu Jan 5 11:47:39 GMT 2012
Rank9Aligned Residues98
% Identity17%Templatec3rlbA_
PDB info PDB header:thiamine-binding proteinChain: A: PDB Molecule:thit; PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380.........390....... ..400.........410.........420.........430.........440.........
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Query Sequence  VTVGRKFGFFIAIVSVLVAPWIA. . . . . NAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYIT
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Template Sequence  LRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLV. . . . . . . . APVSLGIAGLFRQK. TAPLKLAPVLLGTFVAVL
Template Known Secondary structure 
TT
S

SST........GGGGGGG


.SSS

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   4950.........60.........70.........80....... ..90.........100. ........110.........
 
   450... ......460.........470.........480.
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Query Sequence  INYL. . . . . . . . . . . . . . VKFDFHFLYVLACTFCINVVVMLVIGFI
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Template Sequence  LKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVI
Template Known Secondary structure 
GGG

TT

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   120.........130.........140.........150.........160.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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