 |
Job Description | P31448 | Confidence | 2.37% | Date | Thu Jan 5 11:47:39 GMT 2012 |
Rank | 74 | Aligned Residues | 36 |
% Identity | 8% | Template | c2ww9B_ |
PDB info |
PDB header:ribosome | Chain: B: PDB Molecule:protein transport protein sss1; |
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
|
Resolution | 8.60 Å |
|
  |   |
356 | . | . | . | 360 | . | . | . | . | . | . | |
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | M | G | I | Y | R | R | I | I | N | . |
Q | N | A | E | P | Q | Q | L | V | T | V | G | R | K | F | G | F | F | I | A | I | V | S | V | L |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   |   | . |
|   |
|
|   |
|   |   |
|   |
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|   |
|
Template Sequence |   |
F | V | R | E | G | T | Q | F | L | A | K | C | K | K | P | D | L | K | E | Y | T | K | I | V | K | A | V | G | I | G | F | I | A | V | G | I | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|