Job Description P31448 Confidence 2.76% Date Thu Jan 5 11:47:39 GMT 2012 Rank 49 Aligned Residues 70 % Identity 19% Template c2b5fD_ PDB info PDB header:transport protein,membrane protein Chain: D: PDB Molecule:aquaporin; PDBTitle: crystal structure of the spinach aquaporin sopip2;1 in an2 open conformation to 3.9 resolution Resolution 3.90 Å

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		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.							.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.				.	.	560	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.																																	.	.	.
Query SS confidence																																		.	.	.	.	.	.																																	.	.	.
Query Sequence		F	A	V	D	M	K	P	W	K	N	V	K	I	A	S	I	G	I	L	F	A	M	I	G	V	Y	A	G	L	A	E	F	.	.	.	.	.	.	G	G	Y	G	T	R	W	L	A	M	I	S	Y	F	I	A	A	V	V	I	V	Y	L	I	F	D	S	W	R	H	R	H	.	.	.	D	P	A	V	T	F
Query Conservation																																		.	.	.	.	.	.																																	.	.	.
Alig confidence																																		.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		D	L	G	E	L	K	L	W	S	F	W	R	A	A	I	A	E	F	I	A	T	L	L	F	L	Y	I	T	V	A	T	V	I	G	H	S	K	E	T	V	V	C	G	S	V	G	L	L	G	I	A	W	A	F	G	G	M	I	F	V	L	V	Y	C	T	A	G	I	S	G	G	H	I	N	P	A	V	T	F
Template Known Secondary structure								S	G	G	G	T	T																									T		S	S	T	T		S																						T	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions