Return to main results Retrieve Phyre Job Id

Job DescriptionP31448
Confidence2.58%DateThu Jan 5 11:47:39 GMT 2012
Rank56Aligned Residues38
% Identity11%Templatec1qleB_
PDB info PDB header:oxidoreductase/immune systemChain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   532.......540.........550.........560.........
Predicted Secondary structure 













Query SS confidence 





































Query Sequence  WLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKD
Query Conservation                   

                   
Alig confidence 





































Template Conservation      
   
 
 
   
     
 
            
Template Sequence  FVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFTHN
Template Known Secondary structure  SSTTT
SS






Template Predicted Secondary structure 













Template SS confidence 





































   37..40.........50.........60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions