Job Description P0ADE8 Confidence 100.00% Date Thu Jan 5 11:20:50 GMT 2012 Rank 11 Aligned Residues 304 % Identity 13% Template c3tfhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:gcvt-like aminomethyltransferase protein; PDBTitle: dmsp-dependent demethylase from p. ubique - apo Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	T	A	S	A	R	L	P	L	T	L	M	T	L	D	D	W	A	L	A	T	I	T	G	A	D	S	E	K	Y	M	Q	G	Q	V	T	A	D	V	S	Q	M	A	E	D	Q	H	L	L	A	A	H	C	D	A	K	G	K	M	W	S	N	L	R	L	F	R	D	.	G	D	G	F	A	W	I	E	R	R	S
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		S	Y	K	H	L	K	E	H	V	Q	I	W	D	V	A	A	E	R	Q	V	E	I	S	G	K	D	S	A	E	L	V	Q	L	M	T	C	R	D	L	S	K	S	K	I	G	R	C	Y	Y	C	P	I	I	D	E	N	G	N	L	V	N	D	P	V	V	L	K	L	D	E	N	K	W	W	I	S	I	A	D	S
Template Known Secondary structure									S							T	T	S							S	T	T									B	S	S			T	T			T	T	B									T	T	S													T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.
Predicted Secondary structure																											.																										.	.	.	.	.	.																					.
Query SS confidence																											.																										.	.	.	.	.	.																					.
Query Sequence		V	R	E	P	Q	L	T	E	L	K	K	Y	A	V	F	S	K	V	T	I	A	P	D	D	E	.	R	V	L	L	G	V	A	G	F	Q	A	R	A	A	L	A	N	L	F	S	E	L	P	S	K	.	.	.	.	.	.	E	K	Q	V	V	K	E	G	A	T	T	L	L	W	F	E	H	P	A	E	.	R	F
Query Conservation																											.																										.	.	.	.	.	.																					.
Alig confidence														.	.	.											.																										.	.	.	.	.	.																					.
Template Conservation														.	.	.
Template Sequence		D	V	I	F	F	A	K	G	L	A	S	G	.	.	.	H	K	F	D	V	K	I	V	E	P	V	V	D	I	M	A	I	Q	G	P	K	S	F	A	L	M	E	K	V	F	G	K	K	I	T	E	L	K	F	F	G	F	D	Y	F	D	F	E	G	T	K	H	L	I	A	R	S	G	W	S	K	Q	G	G	Y
Template Known Secondary structure														.	.	.	T	T									S								S	T	T											G	G	G	G	G			T	T	B							T	T							S			S	S	S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		162	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.
Predicted Secondary structure								.																.	.											.																																					.
Query SS confidence								.																.	.											.																																					.
Query Sequence		L	I	V	T	D	E	.	A	T	A	N	M	L	T	D	K	L	R	G	E	A	E	.	.	L	N	N	S	Q	Q	W	L	A	L	.	N	I	E	A	G	F	P	V	I	D	A	A	N	S	G	Q	F	I	P	Q	A	T	N	L	Q	A	L	G	G	I	S	F	K	K	G	C	.	Y	T	G	Q	E	M	V	A
Query Conservation								.																.	.											.																																					.
Alig confidence								.																.	.											.																												.	.								.
Template Conservation																																																																.	.
Template Sequence		E	V	Y	V	E	N	T	Q	S	G	Q	K	L	Y	D	H	L	F	E	V	G	K	E	F	N	V	G	P	G	C	P	N	L	I	E	R	I	E	S	A	L	L	S	Y	G	N	D	F	D	N	N	D	N	P	F	E	C	G	F	D	Q	Y	.	.	V	S	L	D	S	D	I	N	F	L	G	K	E	K	L	K
Template Known Secondary structure						S	S															T	G	G	G	T														T	T				B	T	T	T	B		T	T			T	T	T	T	T		G	G	G	.	.				S	S	S				T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																				.	.																											.	.
Query SS confidence																																																				.	.																											.	.
Query Sequence		R	A	K	F	R	G	A	N	K	R	A	L	W	L	L	A	G	S	A	S	R	L	P	E	A	G	E	D	L	E	L	K	M	G	E	N	W	R	R	T	G	T	V	L	A	A	V	K	L	E	.	.	D	G	Q	V	V	V	Q	V	V	M	N	N	D	M	E	P	D	S	I	F	R	V	R	D	D	A	.	.
Query Conservation																																																				.	.																											.	.
Alig confidence								.																										.	.																	.	.																											.	.
Template Conservation								.																										.	.
Template Sequence		E	I	K	L	K	G	.	P	Q	K	K	L	R	G	V	K	I	D	I	K	E	I	S	L	T	G	S	K	N	I	Y	D	.	.	E	N	N	N	V	I	G	E	L	R	S	A	C	Y	S	P	H	F	Q	K	V	I	G	I	A	M	I	K	K	S	H	W	E	A	S	Q	G	F	K	I	Q	I	N	D	N	T
Template Known Secondary structure								.		S									S		S						S							.	.	T	T	S													T	T	T	T										G	G	G		S	T	T								T	T
Template Predicted Secondary structure								.																										.	.
Template SS confidence
		282	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	H	I	E	P	L	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	G	N	V	C	D	L	P	F
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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