Job Description P0ADE8 Confidence 100.00% Date Thu Jan 5 11:20:50 GMT 2012 Rank 2 Aligned Residues 311 % Identity 19% Template c3girA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminomethyltransferase; PDBTitle: crystal structure of glycine cleavage system2 aminomethyltransferase t from bartonella henselae Resolution 1.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	T	A	S	A	R	L	P	L	T	L	M	T	L	D	D	W	A	L	A	T	I	T	G	A	D	S	E	K	Y	M	Q	G	Q	V	T	A	D	V	S	Q	M	A	E	D	Q	H	L	L	A	A	H	C	D	A	K	G	K	M	W	S	N	L	R	L	F	R	D	.	G	D	G	F	A	W	I	E	R	R	S
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		E	H	L	H	T	R	A	H	A	G	L	F	D	I	S	H	M	K	L	I	A	V	E	G	P	K	A	V	E	F	L	S	Y	A	L	P	V	D	A	A	L	L	K	I	G	Q	S	R	Y	S	Y	L	L	N	E	R	A	G	I	L	D	D	L	I	L	T	R	L	A	E	C	R	F	M	L	V	A	N	A	G
Template Known Secondary structure									S							T	T	S							S	T	T									S	S	S		T	T	T	S		T	T	B									T	T														T	T								G	G
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.																	.
Query SS confidence																																																								.	.																	.
Query Sequence		V	R	E	P	Q	L	T	E	L	K	K	Y	A	V	F	S	K	V	T	I	A	P	D	D	E	R	V	L	L	G	V	A	G	F	Q	A	R	A	A	L	A	N	L	F	S	E	L	P	S	K	E	K	Q	V	.	.	V	K	E	G	A	T	T	L	L	W	F	E	H	P	A	E	.	R	F	L	I	V	T	D
Query Conservation																																																								.	.																	.
Alig confidence																								.																																.	.																	.
Template Conservation																								.
Template Sequence		N	A	Q	A	D	F	A	E	L	E	K	R	A	F	G	F	E	C	Q	V	I	A	.	L	E	R	V	L	L	A	L	Q	G	P	Q	A	A	A	V	L	A	D	A	G	L	P	G	N	E	L	L	F	M	Q	G	F	E	P	Q	Q	D	W	F	I	T	R	S	G	Y	T	G	E	D	G	F	E	I	A	L	P
Template Known Secondary structure		G												T	T	T	S	S						.										S	T	T								T	T				T	T			T	T	B				S	S	T	T					S			S	S	S	S	S
Template Predicted Secondary structure																								.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																	.	.																																							.
Query SS confidence																	.	.																																							.
Query Sequence		E	A	T	A	N	M	L	T	D	K	L	R	G	E	A	.	.	E	L	N	N	S	Q	Q	W	L	A	L	N	I	E	A	G	F	P	V	I	D	A	A	N	S	G	Q	F	I	P	Q	A	T	N	L	Q	A	L	.	G	G	I	S	F	K	K	G	C	Y	T	G	Q	E	M	V	A	R	A	K	F	R	G	A
Query Conservation																	.	.																																							.
Alig confidence																	.	.																																							.																								.
Template Conservation																																																																																	.
Template Sequence		I	G	C	A	R	A	L	A	E	K	L	L	G	D	S	R	V	E	W	V	G	L	A	A	R	D	S	L	R	L	E	A	G	L	C	L	H	G	N	D	I	T	P	D	T	T	P	I	D	A	A	L	T	W	A	V	P	K	N	V	R	E	K	A	Q	F	Y	G	A	K	A	F	L	E	S	L	Q	K	G	.
Template Known Secondary structure														T	S	T	T																T	T				B	T	T	T	B		T	T			T	T	T	T	T		G	G	G	S										S	T	T												.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																													.	.																												.	.
Query SS confidence																																													.	.																												.	.
Query Sequence		N	K	R	A	L	W	L	L	A	G	S	A	S	R	L	P	E	A	G	E	D	L	E	L	K	M	G	E	N	W	R	R	T	G	T	V	L	A	A	V	K	L	E	.	.	D	G	Q	V	V	V	Q	V	V	M	N	N	D	M	E	P	D	S	I	F	R	V	R	D	D	A	N	.	.	T	L	H	I	E	P
Query Conservation																																													.	.																												.	.
Alig confidence																										.	.	.																	.	.																												.	.
Template Conservation																										.	.	.
Template Sequence		P	S	R	C	R	V	G	L	K	P	Q	T	R	Q	P	I	R	A	G	A	V	L	F	D	.	.	.	N	E	G	N	R	I	G	V	V	T	S	G	G	F	G	P	S	F	D	G	P	V	A	M	G	Y	V	P	V	A	W	K	V	E	G	T	E	V	F	T	E	L	R	G	K	K	I	A	L	S	V	H	S
Template Known Secondary structure			S	S								S	S	S	S				T	T						.	.	.	T	T	S													T	T	T	T										G	G	G		S	T	T								T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Y	S	L	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	F	V	E	Q	R
Template Known Secondary structure		S		S	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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