Job Description P0ADE8 Confidence 100.00% Date Thu Jan 5 11:20:50 GMT 2012 Rank 1 Aligned Residues 323 % Identity 97% Template c1vlyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:unknown protein from 2d-page; PDBTitle: crystal structure of a putative aminomethyltransferase (ygfz) from2 escherichia coli at 1.30 a resolution Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	P	F	P	P	R	Q	P	T	A	S	A	R	L	P	L	T	L	M	T	L	D	D	W	A	L	A	T	I	T	G	A	D	S	E	K	Y	M	Q	G	Q	V	T	A	D	V	S	Q	M	A	E	D	Q	H	L	L	A	A	H	C	D	A	K	G	K	M	W	S	N	L	R	L	F	R	D	G	D	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	P	F	P	P	R	Q	P	T	A	S	A	R	L	P	L	T	L	X	T	L	D	D	W	A	L	A	T	I	T	G	A	D	S	E	K	Y	X	Q	G	Q	V	T	A	D	V	S	Q	X	A	E	D	Q	H	L	L	A	A	H	C	D	A	K	G	K	X	W	S	N	L	R	L	F	R	D	G	D	G	F
Template Known Secondary structure													G	G	G			S						T	T								S	T	T							T	T	B	S	S		G	G	G			T	T										T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	I	E	R	R	S	V	R	E	P	Q	L	T	E	L	K	K	Y	A	V	F	S	K	V	T	I	A	P	D	D	E	R	V	L	L	G	V	A	G	F	Q	A	R	A	A	L	A	N	L	F	S	E	L	P	S	K	E	K	Q	V	V	K	E	G	A	T	T	L	L	W	F	E	H	P	A	E	R	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	I	E	R	R	S	V	R	E	P	Q	L	T	E	L	K	K	Y	A	V	F	S	K	V	T	I	A	P	D	D	E	R	V	L	L	G	V	A	G	F	Q	A	R	A	A	L	A	N	L	F	S	E	L	P	S	K	E	K	Q	V	V	K	E	G	A	T	T	L	L	W	F	E	H	P	A	E	R	F	L
Template Known Secondary structure																			T	T		S	S	S	S								S	S							S	T	T							T	T	S	S				B	T	T	B						T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	D	E	A	T	A	N	M	L	T	D	K	L	R	G	E	A	E	L	N	N	S	Q	Q	W	L	A	L	N	I	E	A	G	F	P	V	I	D	A	A	N	S	G	Q	F	I	P	Q	A	T	N	L	Q	A	L	G	G	I	S	F	K	K	G	C	Y	T	G	Q	E	M	V	A	R	A	K	F	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	T	D	E	A	T	A	N	X	L	T	D	K	L	R	G	E	A	E	L	N	N	S	Q	Q	W	L	A	L	N	I	E	A	G	F	P	V	I	D	A	A	N	S	G	Q	F	I	P	Q	A	T	N	L	Q	A	L	G	G	I	S	F	K	K	G	C	Y	T	G	Q	E	X	V	A	R	A	K	F	R	G
Template Known Secondary structure																	B	T	T	B																T						G	G	G	T	T	S			G	G	G	G	T	G	G	G	T	T				S	S	S				T	T							T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	K	R	A	L	W	L	L	A	G	S	A	S	R	L	P	E	A	G	E	D	L	E	L	K	M	G	E	N	W	R	R	T	G	T	V	L	A	A	V	K	L	E	D	G	Q	V	V	V	Q	V	V	M	N	N	D	M	E	P	D	S	I	F	R	V	R	D	D	A	N	T	L	H	I	E	P	L	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	K	R	A	L	W	L	L	A	G	S	A	S	R	L	P	E	A	G	E	D	L	E	L	K	X	G	E	N	W	R	R	T	G	T	V	L	A	A	V	K	L	E	D	G	Q	V	V	V	Q	V	V	X	N	N	D	X	E	P	D	S	I	F	R	V	R	D	D	A	N	T	L	H	I	E	P	L	P	Y
Template Known Secondary structure		S													S	S				T	T								T	T															T	T	S										T	T			T	T					S	T	T		S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		323	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		323	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions