Job Description P0ADE8 Confidence 100.00% Date Thu Jan 5 11:20:50 GMT 2012 Rank 4 Aligned Residues 307 % Identity 15% Template c1pj6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	T	A	S	A	R	L	P	L	T	L	M	T	L	D	D	W	A	L	A	T	I	T	G	A	D	S	E	K	Y	M	Q	G	Q	V	T	A	D	V	S	Q	M	A	E	D	Q	H	L	L	A	A	H	C	D	A	K	G	K	M	W	S	N	L	R	L	F	R	D	.	G	D	G	F	A	W	I	E	R	R	S
Query Conservation																																																																						.
Alig confidence																																										.																												.
Template Conservation																																										.
Template Sequence		E	A	W	K	T	R	T	A	V	A	M	Y	D	M	T	P	L	K	R	L	E	V	S	G	P	G	A	L	K	L	L	Q	E	L	T	T	A	D	L	A	.	K	K	P	G	A	V	T	Y	T	L	L	L	D	H	A	G	G	V	R	S	D	I	T	V	A	R	L	S	E	D	T	F	Q	L	G	A	N	G	N
Template Known Secondary structure									S							T	T	S							S	T	T									B	S	S				.			T	T	B									T	T	S													T	T							S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.										.																				.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.										.																				.	.	.	.	.	.	.	.
Query Sequence		V	R	E	P	Q	L	T	E	L	K	K	Y	A	V	F	S	.	.	.	.	.	K	V	T	I	A	P	D	D	E	.	R	V	L	L	G	V	A	G	F	Q	A	R	A	A	L	A	N	L	F	.	.	.	.	.	.	.	.	S	E	L	P	S	K	E	K	Q	V	V	K	E	G	A	T	T	L	L	W	F	E
Query Conservation																		.	.	.	.	.										.																				.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.										.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	T	A	Y	F	E	R	A	A	R	H	Q	T	Q	S	G	S	A	T	D	W	V	Q	V	R	D	T	T	G	G	T	C	C	I	G	L	W	G	P	L	A	R	D	L	V	S	K	V	S	D	D	D	F	T	N	D	G	L	K	Y	F	R	A	K	N	V	V	I	G	G	I	P	V	T	A	M	R	L	S
Template Known Secondary structure																		S		T	T									G	G	G								S	T	T						T	T	S			S			S	T	T	T	S		T	T	B							T	T
Template Predicted Secondary structure
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		156	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																							.	.	.	.	.
Query SS confidence						.																							.	.	.	.	.
Query Sequence		H	P	A	E	.	R	F	L	I	V	T	D	E	A	T	A	N	M	L	T	D	K	L	R	G	E	A	.	.	.	.	.	E	L	N	N	S	Q	Q	W	L	A	L	N	I	E	A	G	F	P	V	I	D	A	A	N	S	G	Q	F	I	P	Q	A	T	N	L	Q	A	L	G	G	I	S	F	K	K	G	C	Y
Query Conservation						.																							.	.	.	.	.
Alig confidence						.																							.	.	.	.	.																																							.	.
Template Conservation																																																																								.	.
Template Sequence		Y	V	G	E	L	G	W	E	L	Y	T	S	A	D	N	G	Q	R	L	W	D	A	L	W	Q	A	G	Q	P	F	G	V	I	A	A	G	R	A	A	F	S	S	L	R	L	E	K	G	Y	R	S	W	G	T	D	M	T	T	E	H	D	P	F	E	A	G	L	G	F	A	.	.	V	K	M	A	K	E	S	F
Template Known Secondary structure		T	T	S	S	S																							G	G	G	T																T	T				B	T	T	T	B		T	T	S		T	T	T	T	T		G	G	G	.	.			T	T	S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720			.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																													.																															.	.
Query SS confidence																													.																															.	.
Query Sequence		T	G	Q	E	M	V	A	R	A	K	F	R	G	A	N	K	R	A	L	W	L	L	A	G	S	A	S	.	R	L	P	E	A	G	E	D	L	E	L	K	M	G	E	N	W	R	R	T	G	T	V	L	A	A	V	K	L	E	.	.	D	G	Q	V	V	V	Q	V	V	M	N	N	D	M	E	P	D	S	I	F
Query Conservation																													.																															.	.
Alig confidence															.														.												.	.	.	.																.	.											.
Template Conservation															.																										.	.	.	.																												.
Template Sequence		I	G	K	G	A	L	E	G	R	T	E	E	A	.	S	A	R	R	L	R	C	L	T	I	D	D	G	R	S	I	V	L	G	K	E	P	V	F	Y	.	.	.	.	K	E	Q	A	V	G	Y	V	T	S	A	A	Y	G	Y	T	V	A	K	P	I	A	Y	S	Y	L	P	.	G	T	V	S	V	G	D	S	V
Template Known Secondary structure		T	T	T	G	G	G	T	T			S	T	T	.		S									T	T	S						S							.	.	.	.	T	T													T	T	T	T										.	T	T	S		T	T
Template Predicted Secondary structure															.																										.	.	.	.																												.
Template SS confidence
		729	730	.	.	.	.	.	.	.	.	.	740	.		.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.					.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.		.	.	.	.	.	.	800	.	.
		307	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		R	V	R	D	D	A	.	.	N	T	L	H	I	E	P	L	P	Y	S	L	E	E
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		D	I	E	Y	F	G	R	R	I	T	A	T	V	T	E	D	P	L	Y	D	P	K
Template Known Secondary structure						T	T										S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions