 |
Job Description | P76170 | Confidence | 3.42% | Date | Thu Jan 5 12:20:04 GMT 2012 |
Rank | 50 | Aligned Residues | 46 |
% Identity | 17% | Template | c2hkeB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative; |
PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei
|
Resolution | 1.80 Å |
|
 |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | Q | K | V | N | K | R | T | E | K | E | W | D | K | A | D | A | A | F | D | N | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | C | E | Q | S | A | N | I | N | A | Y | W | E | P | N | T | L | R | C | L | D | R |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|   |   |
|
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
M | K | K | R | I | S | E | T | V | P | E | R | M | K | I | A | S | R | A | I | K | A | R | D | F | A | T | F | A | E | I | A | M | L | E | S | D | D | L | Q | E | I | C | A | T | T | E | P | K | I | T | Y | A | T | E | D | S | Y | A | M | I | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|