Return to main results Retrieve Phyre Job Id

Job DescriptionP46126
Confidence5.70%DateThu Jan 5 12:04:04 GMT 2012
Rank6Aligned Residues22
% Identity18%Templatec2hpcH_
PDB info PDB header:blood clottingChain: H: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30...
Predicted Secondary structure 











Query SS confidence 





















Query Sequence  LSGCSHMANDSWSGQDKAQHFI
Query Conservation      
    
 
 
 

  

 
Alig confidence 





















Template Conservation        
 







 

 

Template Sequence  GKNYCGLPGEYWLGNDKISQLT
Template Known Secondary structure  T




T
Template Predicted Secondary structure 











Template SS confidence 





















   282.......290.........300...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions