Job Description P13009 Confidence 89.06% Date Thu Jan 5 11:33:23 GMT 2012 Rank 105 Aligned Residues 172 % Identity 12% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	.	.	.	.	.	.	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																													.						.	.	.	.	.	.
Template Conservation																																																															.						.	.	.	.	.	.
Template Sequence		K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	.	G	T	C	E	D	.	.	.	.	.	.	M	M	K	R	A	V	F
Template Known Secondary structure														T	T		S	B				T	T		S	S	B	T	T	B																					S	S			B								.	S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																															.						.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.							.	250	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.																			.	.	.	.	.
Query SS confidence																																																									.	.																			.	.	.	.	.
Query Sequence		L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	.	.	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	.	.	.	.	.
Query Conservation																																																									.	.																			.	.	.	.	.
Alig confidence																																												.	.	.	.	.									.	.																			.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	.	.	.	.	.	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L	R	L	S	G	G	D	H	I	H	S	G	T	V
Template Known Secondary structure						T		S																									T								T	T		.	.	.	.	.					S		S	S	S	S																S							S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.													.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	Y	T	E	K	D	R	S	R	G	I	Y	F	T	Q	S	W	V	S	T	P	G	V	L	P	V	A	S	G
Template Known Secondary structure		S	S	S	S																	S					B	G	G	G	T	B		S					T	T										S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions