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Job DescriptionP13009
Confidence100.00%DateThu Jan 5 11:33:23 GMT 2012
Rank7Aligned Residues296
% Identity33%Templated3bofa2
SCOP infoTIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIET
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Template Sequence  MRNRREVSKLLSERVLLLDGAYGTEFMKYGYD. . . . . . . . . . . . . . . . . DLPEELNIKAPDVVLKVHRSYIESGSDVILT
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SGGGT

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GGG
TTT
S
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   1........10.........20.........30.. .......40.........50.........60...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  NTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVA
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Template Sequence  NTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEK. . . . . . . . . LVFGDIGPTGELPYP. . . . . . . . LGSTLFEEFYE
Template Known Secondary structure  S
TT
SGGGT
GGGTTS.........


S

BTT........TSSB
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   64.....70.........80.........90.........100 .........110..... ....120......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEAL
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Template Sequence  NFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREV. . . . SRDVFLIAHMTF. DEKGRSLTGTDPANFAITFDELDID
Template Known Secondary structure  TT
S

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SSS


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TTS

TT


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S
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   127..130.........140.........150.........160.... .....170...... ...180.........190.........200.
 
   242.......250.........260.........270........ .280.........290.........300.........310........
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Query Sequence  TFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLP. . . NAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHI
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Template Sequence  ALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYY. ELGVNIFGGCCGTTPEHV
Template Known Secondary structure  SSS
T

S

SSS
TT



TT.TT
S


TT

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   202.......210.........220.........230.........240.........250.........260.. .......270.........280
 
   319320.........330.......
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Query Sequence  AAMSRAVEGLAPRKLPEIP
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Template Sequence  KLFRKVLGNRKPLQRKKKR
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   281........290.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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