Job Description P13009 Confidence 100.00% Date Thu Jan 5 11:33:23 GMT 2012 Rank 7 Aligned Residues 296 % Identity 33% Template d3bofa2 SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 1.70

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	K	V	E	Q	L	R	A	Q	L	N	E	R	I	L	V	L	D	G	G	M	G	T	M	I	Q	S	Y	R	L	N	E	A	D	F	R	G	E	R	F	A	D	W	P	C	D	L	K	G	N	N	D	L	L	V	L	S	K	P	E	V	I	A	A	I	H	N	A	Y	F	E	A	G	A	D	I	I	E	T
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	N	R	R	E	V	S	K	L	L	S	E	R	V	L	L	L	D	G	A	Y	G	T	E	F	M	K	Y	G	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	P	E	E	L	N	I	K	A	P	D	V	V	L	K	V	H	R	S	Y	I	E	S	G	S	D	V	I	L	T
Template Known Secondary structure																							S					G	G	G	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G																		T	T	T		S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	F	N	S	T	T	I	A	M	A	D	Y	Q	M	E	S	L	S	A	E	I	N	F	A	A	A	K	L	A	R	A	C	A	D	E	W	T	A	R	T	P	E	K	P	R	Y	V	A	G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		N	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	.	.	.	.	.	.	.	.	.	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	.	.	.	.	.	.	.	.	L	G	S	T	L	F	E	E	F	Y	E
Template Known Secondary structure		S		T	T		S					G	G	G	T		G	G	G																	T	T	S	.	.	.	.	.	.	.	.	.										S			B	T	T	.	.	.	.	.	.	.	.	T	S	S	B
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L
Query Conservation
Alig confidence																																								.	.	.	.													.
Template Conservation																																								.	.	.	.													.
Template Sequence		N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	.	.	.	.	S	R	D	V	F	L	I	A	H	M	T	F	.	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D
Template Known Secondary structure													T	T		S																								.	.	.	.		S	S	S									.		T	T	S			T	T													T	S	S		S
Template Predicted Secondary structure																																								.	.	.	.													.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	.	.	.	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																						.
Template Conservation																																																															.
Template Sequence		A	L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	K	P	I	V	E	N	G	K	T	V	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	.	E	L	G	V	N	I	F	G	G	C	C	G	T	T	P	E	H	V
Template Known Secondary structure							S	S	S															T			S								S	S	S					T	T													T	T						.		T	T		S						T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	F	R	K	V	L	G	N	R	K	P	L	Q	R	K	K	K	R
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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