Job Description P13009 Confidence 90.71% Date Thu Jan 5 11:33:23 GMT 2012 Rank 93 Aligned Residues 197 % Identity 17% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	.	.	.	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V
Query Conservation																								.	.	.
Alig confidence																								.	.	.							.	.	.	.	.	.	.	.	.															.
Template Conservation																																	.	.	.	.	.	.	.	.	.															.
Template Sequence		K	G	P	Q	F	G	V	Q	G	I	R	E	F	M	G	V	K	D	R	P	L	T	A	T	V	P	K	P	K	M	G	.	.	.	.	.	.	.	.	.	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	.	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V
Template Known Secondary structure					S	S										T			S	S								S	S	S	S		.	.	.	.	.	.	.	.	.															.		T	T		S						T	T		S		B	T	T	B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	D	E	G
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	T	G	.	.	.	.	.	.	.	.	.	.	.	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A
Template Known Secondary structure																S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S	.	.	.	.	.	.	.	.	.	.	.	S															T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																	.	.	.	.												230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	.	.	.	.	.	.	.	L	A	I	H	A	H	R	A	M	H	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	N	P	R	H	G	I	T	.	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T
Template Known Secondary structure																	T	.	.	.	.	.	.	.								T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		T	T	S	S			.												T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.															.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions