 |
Job Description | P13009 | Confidence | 40.49% | Date | Thu Jan 5 11:33:23 GMT 2012 |
Rank | 314 | Aligned Residues | 74 |
% Identity | 12% | Template | d1x74a1 |
SCOP info | CoA-transferase family III (CaiB/BaiF)
| CoA-transferase family III (CaiB/BaiF)
| CoA-transferase family III (CaiB/BaiF)
|
Resolution | 1.79 |
|
 |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | L | S | K | P | E | V | I | A | A | I | H | N | A | Y | F | E | A | G | A | D | I | I | E | T | N | T | F | N | S | T | T | I | A | M | A | D | Y | Q | M | E | . |
S | L | S | A | E | I | N | F | A | A | A | K | L | A | R | A | C | A | D | E | W | T | A | R | T | P | E | K | P | R | Y | V | A | G | V | L | G |
Query Conservation |   |
|
|
|
|   |
|
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   | . |
|   |
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |
|
|
|
|
|   |
|   | . | . | . |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |   |
|
|
Template Sequence |   |
A | D | L | K | S | D | Q | G | L | E | L | A | L | K | . |
. |
L | I | A | K | A | D | V | L | I | E | G | Y | . |
. |
. |
R | P | G | V | T | E | R | L | G | L | G | P | E | E | C | A | K | V | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | R | L | I | Y | A | R | M | T |
Template Known Secondary structure |   |
|
| T | T | S |  |  |  |  |  |  |  |  |  | . | . |  |  | T | T |
| S |  |  |  |  |
| S | . | . | . |
| T | T |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 110 | . | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | N | R | T | A | S | I | S | P | D | V | N | D | P | A | F | R | N | I | T | F | D | G | L | V | A | A | Y |
Query Conservation |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
| . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
G | W | G | . |
. |
. |
. |
. |
. |
. |
. |
Q | T | G | P | R | S | Q | Q | A | G | H | D | I | N | Y | I | S | L |
Template Known Secondary structure |   |
S | S |
| . | . | . | . | . | . | . | . | S | S | S | T | T | T | T | S |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|