Job Description P13009 Confidence 86.17% Date Thu Jan 5 11:33:23 GMT 2012 Rank 113 Aligned Residues 158 % Identity 15% Template d1wdda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.35

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	.	.	.	.	.	.	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																																	.						.	.	.	.	.	.
Template Conservation																																																															.						.	.	.	.	.	.
Template Sequence		K	N	Y	G	R	A	C	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	V	F	C	A	E	A	I	Y	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	.	G	T	C	E	E	.	.	.	.	.	.	M	I	K	R	A	V	F
Template Known Secondary structure														T	T		S	B				T	T		S	S	B	T	T	B																					S	S			B								.	S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																															.						.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.							.	250	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																									.	.						.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Query Sequence		L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	.	.	.	.	.	L	P	N	A	F	G	E	Y	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.
Template Conservation
Template Sequence		A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	I	H	A	G	T	V	V	G	K	L	E
Template Known Secondary structure						T		S																									T								T	T						S		S	S	S	S																S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300																					.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																														.	.
Template Sequence		G	E	R	E	M	T	L	G	F	V	D	L	L	R	D	D	F	I	E	K	D	R	A	R	G	I	F	F	T	Q	D	W	V	S	M	P	G	V	I	P	V	A	S	G	.	.	G	I	H	V	W	H	M	P	A	L	T	E	I	F	G	D
Template Known Secondary structure																	S					B	G	G	G	T	B		S					T	T										S	.	.	S			G	G	G										S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions