|   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | S | T | K | A | L | V | E | G | G | A | D | L | I | L | I | E | T | V | F | D | T | L | N | A | K | A | A | V | F | A | V | K | T | E | F | E | A | L | G | V | E | L | P | I | M | I | S | G | T | I | T | D | A | S | G | R | T | L | S | G | Q | T | T | E | A | F | Y | N | S | L | R | H | A | E | A | L | T | F |
Query Conservation |   |
  |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |   |
|
|
|   |   |
|
|
| . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|
|
|   |
|
Template Sequence |   |
V | P | M | A | K | A | L | V | A | G | G | V | R | V | L | N | V | . |
T | L | R | T | E | C | A | V | D | A | I | R | A | I | A | K | E | V | . |
. |
. |
. |
. |
. |
P | E | A | I | V | G | A | G | T | V | L | N | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | L | A | E | V | T | E | A | G | A | Q | F | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . |  | S |
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | T | T | S |  |  |  |  |  | S |
|
| S |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
|
|
. | . | . | . | . | . | 320 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
G | L | N | C | A | L | G | P | D | E | L | R | Q | Y | V | Q | E | L | S | R | I | A | E | C | Y | V | T | A | H | P | N | A | G | L | P | N | A | F | G | E | Y | D | L | D | A | D | T | M | A | K | Q | I | R | E | W | A | Q | A | G | F | L | N | I | V | G | G | C | C | G | T | . |
. |
. |
T | P | Q | H | I | A | A |
Query Conservation |   |
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . |   |   |   |   |
|   |   |   |   |   |   | . | . | . |   |
|   |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |
|   | . | . | . | . | . |   |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | S | P | G | . |
L | T | E | P | L | L | K | A | A | T | E | . |
. |
. |
G | T | I | P | L | I | P | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | T | V | S | E | L | M | L | G | M | . |
. |
. |
. |
. |
D | Y | G | L | K | E | F | K | F | F | P | A | E | A | N | G | G | V | K | A | L | Q | A |
Template Known Secondary structure |   |
 |  | S | S | . |
|
|  |  |  |  |  |  |  |  |  | . | . | . | S | S | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  | . | . | . | . | . |  | T | T |
|
|  |  |  |  | T | T | T | T | T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | |
|
|
. | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | |
. | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | R | A | V | E | G | L | A | P | R | K | L | P | E | I | P | V | A | C | R | L | S | G | L | E | P | L | N | I | G | E | D | S | L | F | V | N | V | G | E | R | T | N | V | T | G | S | A | K | F | . |
K | R | L | I | K | E | E | K | Y | S | E | A | L | D | V | A | R | Q | Q | V | E |
Query Conservation |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|   |
| . |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
I | A | G | P | F | S | Q | V | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | C | P | T | G | G | I | S | P | A | N | Y | R | D | Y | L | A | L | K | S | V | L | C | I | G | G | S | W | L | V | P | A | D | A | L | E | A | G | D | Y | D | R | I | T | K | L | A | R | E | A | V | E |
Template Known Secondary structure |   |
 |  | T | T |
| T | T |
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | B | S | S |
|
| T | T | T |  |  |  |  |  | T | S | T | T | B | S |
|  |  |  | G | G | G | S |
|  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
  |