Job Description P13009 Confidence 28.88% Date Thu Jan 5 11:33:23 GMT 2012 Rank 411 Aligned Residues 138 % Identity 16% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.														.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	.	.	.	.	.	.	.	.	.	F	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T
Query Conservation																													.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																										.
Template Sequence		P	G	I	V	N	D	F	R	Q	A	V	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	Q	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S	A	D	.	R	I	G	I	R	V	S
Template Known Secondary structure																		T	T		S								T	T	S								T	T	T					S	T	T	S	S	S					T														S		G	G	.	G
Template Predicted Secondary structure																																																																										.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																					.	.	.
Query SS confidence													.	.	.	.																					.	.	.
Query Sequence		I	T	D	A	S	G	R	T	L	S	G	.	.	.	.	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	.	.	.	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D
Query Conservation													.	.	.	.																					.	.	.
Alig confidence													.	.	.	.																					.	.	.																											.	.				.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.				.	.	.	.	.	.	.	.	.
Template Sequence		P	I	G	T	F	Q	N	V	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	E	L	A	K	R	G	I	A	Y	L	H	M	S	E	T	D	L	A	G	G	K	P	Y	S	E	A	F	R	Q	K	V	R	E	R	F	H	G	V	I	I	G	.	.	A	G	A	.	.	.	.	.	.	.	.	.	Y	T
Template Known Secondary structure			S	S		B	T	T	B				T	T															T	T		S								B	T	T	B																		S					.	.		S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.				.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.										.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		A	.	.	.	.	E	K	A	E	D	L	I	G	K	G	L	I	D	A	V	A	F	G
Template Known Secondary structure			.	.	.	.									T	T	S		S					S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		305					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions