 |
Job Description | P13009 | Confidence | 26.74% | Date | Thu Jan 5 11:33:23 GMT 2012 |
Rank | 436 | Aligned Residues | 90 |
% Identity | 20% | Template | d1v8aa_ |
SCOP info | Ribokinase-like
| Ribokinase-like
| Thiamin biosynthesis kinases
|
Resolution | 1.85 |
|
 |
  |   |
389 | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | |
|
|
|
. | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | |
|
|
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
Q | Q | V | E | N | G | A | Q | I | I | D | I | N | M | D | E | G | M | L | D | A | E | A | A | M | V | R | F | L | N | L | I | A | G | E | P | D | I | A | R | V | P | I | M | I | D | . |
. |
. |
. |
S | S | K | W | D | V | I | E | K | G | L | K | C | I | Q | G | K | G | I | V | N | S | I | S | M | K | E | . |
. |
. |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
| . | . | . | . |
|
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|
|
|
|
|   |
|
| . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |
|   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |
Template Sequence |   |
E | E | M | I | R | L | A | D | A | V | V | I | N | I | G | T | L | D | S | G | W | R | R | S | M | V | K | A | T | E | I | A | N | E | . |
. |
. |
. |
L | G | K | P | I | V | L | D | P | V | G | A | G | A | T | K | F | R | T | R | V | S | L | E | I | L | S | R | G | V | D | V | L | K | G | N | F | G | E | I | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | T |
|
|  |  |  |  |
| T | T | B | T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
462 | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
G | V | D | A | F | I | H | H | A | K | L | L | R | R | Y | G | A | A | V | V | V |
Query Conservation |   |
. | . | . | . | . | . | . |
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
Template Sequence |   |
L | L | G | E | E | G | G | E | E | E | A | K | K | L | T | M | N | A | A | R | E | F | N | T | T | V | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|