Job Description P13009 Confidence 44.12% Date Thu Jan 5 11:33:23 GMT 2012 Rank 289 Aligned Residues 211 % Identity 20% Template d1pv8a_ SCOP info TIM beta/alpha-barrel Aldolase 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) Resolution 2.20

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E
Query Conservation
Alig confidence																																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	R	L	E	E	M	L	R	P	L	V	E	E	G	L	R	C	V	L	I	F	G	V	P	E	E	S	P	A	I	E	A	I	H	L	L	R	K	T	F	.	.	.	.	P	N	L	L	V	A	C	D	V	C	L	C	A	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T													S													S	.	.	.	.	T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	S	R	Q	R	L	A	E	V	A	L	A	Y	A	.	K	A	G	C	Q	V	V	A	P	S	D	.	.	.	D	G	R	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.			T		S							.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.
Template SS confidence
																																														143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D
Query Conservation
Alig confidence									.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	K	E	A	L	M	.	.	A	H	G	L	G	N	R	V	S	V	M	S	Y	S	A	K	F	A	S	C	F	Y	G	P	F	R	D	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	G	A	R	G	L	A	L	R	A	V	D	R	D	V	R	E	G	A	D	M	L	M
Template Known Secondary structure									.	.		T	T		T	T	T				B									G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T															T	T		S	B
Template Predicted Secondary structure									.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																	.																					.	.																											.
Query SS confidence																	.																					.	.																											.
Query Sequence		I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	.	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	.	.	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	.	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R
Query Conservation																	.																					.	.																											.
Alig confidence																	.			.	.	.	.	.	.	.	.	.	.									.	.													.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	P	G	M	P	Y	L	D	I	V	R	E	V	K	D	K	H	.	.	.	.	.	.	.	.	.	.	P	D	L	P	L	A	V	Y	H	V	S	G	E	F	A	M	L	W	H	G	A	Q	.	.	.	.	.	.	.	.	.	.	.	A	G	A	F	D	L	K	A	A	V	L	E	A	M	T	A	F	R	R
Template Known Secondary structure				S		G	G	G											S	.	.	.	.	.	.	.	.	.	.	T	T	S																				.	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	A	A	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	D	I	I	I
Template Known Secondary structure			T		S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions