Job Description P13009 Confidence 100.00% Date Thu Jan 5 11:33:23 GMT 2012 Rank 8 Aligned Residues 282 % Identity 25% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	Q	L	R	A	Q	L	N	E	R	.	I	L	V	L	D	G	G	M	G	T	M	I	Q	S	Y	R	L	N	E	A	D	F	R	G	E	R	F	A	D	W	P	C	D	L	K	G	N	N	D	L	L	V	L	S	K	P	E	V	I	A	A	I	H	N	A	Y	F	E	A	G	A	D	I	I	E	T	N	T	F
Query Conservation												.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	I	L	E	R	L	N	A	G	E	I	V	I	G	D	G	G	F	V	F	A	L	E	K	R	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	F	T	V
Template Known Secondary structure										T	T							T	T									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	T	T	I	A	M	A	D	Y	Q	M	E	S	L	S	A	E	I	N	F	A	A	A	K	L	A	R	A	C	A	D	E	W	T	A	R	T	P	E	K	P	R	Y	V	A	G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	D	I	A	R	Q	V	A	D	E	.	.	.	.	.	.	.	G	D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	.	.	.	.	.	.	.	.	.	.	.	L	S	A	K	S	E	T	E	V	K	K	V	F	L
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	.	.	.	.	.	.	.	T	T														.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.																				.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G
Query Conservation
Alig confidence																																					.	.	.	.	.	.											.					.
Template Conservation																																					.	.	.	.	.	.											.					.
Template Sequence		Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	S	.	.	.	.	.	.	G	K	P	V	A	A	T	M	A	I	.	G	P	E	G	.	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I	I	G
Template Known Secondary structure										T	T		S								S													G	G	G	.	.	.	.	.	.	S	S									.	B	T	T	B	.	S	T	T	S													T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.											.					.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.		.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.																.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	.	.	.	.	.	I	A	E	C	Y	V	T	A	H	P	N	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L
Query Conservation																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																													.
Template Sequence		V	N	C	H	F	D	P	T	I	S	L	K	T	V	K	L	M	K	E	G	L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	.	N	L	G	V
Template Known Secondary structure				S	S	S																			T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S		G	G	G	B															.			T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	I	G	G	C	C	G	F	E	P	Y	H	I	R	A	I	A	E	E	L	A	P	E	R	G	F	L	P	P	R	A	.	.	.	.	.	.	.	.	.	R	A	R	K	E	Y	W	E	N	L	R	I	A	S	G	R	P	Y	N	P	S	M	S	K
Template Known Secondary structure								T	T													T					S	S					T	.	.	.	.	.	.	.	.	.	T	S													S		T	T	S		S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions