 |
Job Description | P13009 | Confidence | 92.66% | Date | Thu Jan 5 11:33:23 GMT 2012 |
Rank | 80 | Aligned Residues | 101 |
% Identity | 21% | Template | d1jvna1 |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Histidine biosynthesis enzymes
|
Resolution | 2.10 |
|
 |
  |   |
379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
. | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 440 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Y | S | E | A | L | D | V | A | R | Q | Q | V | E | N | G | A | . |
. |
. |
Q | I | I | D | I | N | M | D | E | G | M | L | D | A | E | A | A | M | V | R | F | L | N | L | I | A | G | E | P | D | I | A | R | V | P | I | M | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | S | K | W | D | V | I | E |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
| . | . | . |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   | . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   | . | . | . |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
D | L | G | K | P | V | Q | L | A | Q | K | Y | Y | Q | Q | G | A | D | E | V | T | F | L | N | I | T | D | . |
. |
. |
C | P | L | K | D | T | P | M | L | E | V | L | K | Q | A | A | K | T | . |
. |
. |
V | F | V | P | L | T | V | G | G | G | I | K | D | I | V | D | V | D | G | T | K | I | P | A | L | E | V | A | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |
|
| . | . | . |
|
| G | G | G |
|  |  |  |  |  |  |  |  |  | T | T | T | . | . | . |
|
| S |
|  |  |  |  | S | S |
| S |
|  |  |
| T | T |
|
|  |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
|
|
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
|
|
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |
  |   |
443 | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | L | K | C | I | Q | G | K | G | I | V | N | S | I | S | M | K | E | G | V | D | A | F | I | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | A | K | L | L | R | R | Y | G | A | A | V | V | V | M | A | F | D |
Query Conservation |   |
|
|
|
|   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
| . |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
Template Sequence |   |
L | Y | F | R | S | G | A | D | K | V | S | I | G | T | D | A | V | Y | A | . |
A | E | K | Y | Y | E | L | G | N | R | G | D | G | T | S | P | I | E | T | I | S | K | A | Y | G | A | Q | A | V | V | I | S | V | D |
Template Known Secondary structure |   |
 |  |  |  |  | T |
| S |  |  |  |  |
|  |  |  |  |  |  | . |  |  |  |  |  |  | T | T | S |
|
|
| S |
| S |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | |
. | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|